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Protein
Submitted name:

Ribosomal protein L23a

Gene

RPL23A

Organism
Canis lupus familiaris (Dog) (Canis familiaris)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Enzyme and pathway databases

ReactomeiR-CFA-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CFA-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CFA-6791226. Major pathway of rRNA processing in the nucleolus and cytosol.
R-CFA-72689. Formation of a pool of free 40S subunits.
R-CFA-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CFA-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CFA-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein L23aImported
Gene namesi
Name:RPL23AImported
Synonyms:LOC106558887Imported
OrganismiCanis lupus familiaris (Dog) (Canis familiaris)Imported
Taxonomic identifieri9615 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
Proteomesi
  • UP000002254 Componentsi: Chromosome 30, Chromosome 6, Chromosome 9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSCAFG00000016268.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9615.ENSCAFP00000038393.

Structurei

3D structure databases

SMRiE2QZG2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini17 – 67Ribosomal_L23eNInterPro annotationAdd BLAST51

Sequence similaritiesi

Belongs to the universal ribosomal protein uL23 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1751. Eukaryota.
COG0089. LUCA.
GeneTreeiENSGT00390000003263.
KOiK02893.
OMAiHKVIIHP.
OrthoDBiEOG091G0UYL.
TreeFamiTF314116.

Family and domain databases

HAMAPiMF_01369_A. Ribosomal_L23_A. 1 hit.
InterProiView protein in InterPro
IPR019985. Ribosomal_L23.
IPR012678. Ribosomal_L23/L15e_core_dom_sf.
IPR001014. Ribosomal_L23/L25_CS.
IPR005633. Ribosomal_L23/L25_N.
IPR013025. Ribosomal_L25/23.
PfamiView protein in Pfam
PF00276. Ribosomal_L23. 1 hit.
PF03939. Ribosomal_L23eN. 1 hit.
SUPFAMiSSF54189. SSF54189. 1 hit.
TIGRFAMsiTIGR03636. uL23_arch. 1 hit.
PROSITEiView protein in PROSITE
PS00050. RIBOSOMAL_L23. 1 hit.

Sequencei

Sequence statusi: Complete.

E2QZG2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAPKAKKEAP APPKAEAKAK ALKAKKAVLK GVHSHKKKKI RTSPTFRRPK
60 70 80 90 100
TLRLRRQPKY PRKSAPRRNK LDHYAIIKFP LTTESAMKKI EDNNTLVFIV
110 120 130 140 150
DVKANKHQIK QAVKKLYDID VAKVNTLIRP DGEKKAYVRL APDYDALDVA

NKIGII
Length:156
Mass (Da):17,695
Last modified:November 30, 2010 - v1
Checksum:i3980E77B47FAB70E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEX03004285 Genomic DNA. No translation available.
AAEX03006669 Genomic DNA. No translation available.
AAEX03016167 Genomic DNA. No translation available.
RefSeqiXP_013969770.1. XM_014114295.1.

Genome annotation databases

EnsembliENSCAFT00000024486; ENSCAFP00000038393; ENSCAFG00000016268.
ENSCAFT00000025801; ENSCAFP00000036939; ENSCAFG00000031731.
ENSCAFT00000029814; ENSCAFP00000027708; ENSCAFG00000018784.
GeneIDi106558887.
KEGGicfa:106558887.

Similar proteinsi

Entry informationi

Entry nameiE2QZG2_CANLF
AccessioniPrimary (citable) accession number: E2QZG2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: November 22, 2017
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported