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Protein
Submitted name:

Sorting nexin 1

Gene

SNX1

Organism
Canis lupus familiaris (Dog) (Canis familiaris)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sorting nexin 1Imported
Gene namesi
Name:SNX1Imported
OrganismiCanis lupus familiaris (Dog) (Canis familiaris)Imported
Taxonomic identifieri9615 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
Proteomesi
  • UP000002254 Componenti: Chromosome 30

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiE2QYJ3.

Expressioni

Gene expression databases

BgeeiENSCAFG00000017041.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9615.ENSCAFP00000025091.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini142 – 271PXInterPro annotationAdd BLAST130

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili362 – 382Sequence analysisAdd BLAST21
Coiled coili445 – 465Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2273. Eukaryota.
COG5391. LUCA.
GeneTreeiENSGT00900000140874.
InParanoidiE2QYJ3.
OMAiNIPKFKR.
OrthoDBiEOG091G06FB.
TreeFamiTF313698.

Family and domain databases

CDDicd07281. PX_SNX1. 1 hit.
Gene3Di1.20.1270.60. 1 hit.
3.30.1520.10. 1 hit.
InterProiView protein in InterPro
IPR027267. AH/BAR_dom_sf.
IPR001683. Phox.
IPR036871. PX_dom_sf.
IPR034901. PX_SNX1.
IPR028660. SNX1.
IPR005329. Sorting_nexin_N.
IPR015404. Vps5_C.
PANTHERiPTHR10555:SF129. PTHR10555:SF129. 1 hit.
PfamiView protein in Pfam
PF00787. PX. 1 hit.
PF03700. Sorting_nexin. 1 hit.
PF09325. Vps5. 1 hit.
SMARTiView protein in SMART
SM00312. PX. 1 hit.
SUPFAMiSSF103657. SSF103657. 1 hit.
SSF64268. SSF64268. 1 hit.
PROSITEiView protein in PROSITE
PS50195. PX. 1 hit.

Sequencei

Sequence statusi: Complete.

E2QYJ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASGGGGCSA SERLPPPFPG LEPESEGAAG GSEPEAGDSD TEGEDIFTGA
60 70 80 90 100
AAASKPQSPK RIASLPINNG SKENGIHEEQ DQEPQDLFAD ATVELSLDSS
110 120 130 140 150
QNNQKKVPAK TLISLPPQEA TNSSKPQPSY EELEEEEQED QFDLTVGITD
160 170 180 190 200
PEKIGDGMNA YVAYKVTTQT SLPMFRSKQF AVKRRFSDFL GLYEKLSEKH
210 220 230 240 250
SQNGFIVPPP PEKSLIGMTK VKVGKEDSSS AEFLEKRRAA LERYLQRIVN
260 270 280 290 300
HPTMLQDPDV REFLEKEELP RAVGTQTLSG AGLLKMFNKA TDAVSKMTIK
310 320 330 340 350
MNESDIWFEE KLQEVECEEQ RLRKLHAVVE TLVNHRKELA LNTAQFAKSL
360 370 380 390 400
AMLGSSEDNT ALSRALSQLA EVEEKIEQLH QEQANNDFFL LAELLSDYIR
410 420 430 440 450
LLAIVRAAFD QRMKTWQRWQ DAQATLQKKR EAEARLLWAN KPDKLQQAKD
460 470 480 490 500
EILEWESRVT QYERDFERIS TVVRKEVIRF EKEKSKDFKN HVIKYLETLL
510 520
YSQQQLAKYW EAFLPEAKAI S
Length:521
Mass (Da):58,859
Last modified:November 30, 2010 - v1
Checksum:i824A2F94B2F3115D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEX03016204 Genomic DNA. No translation available.
RefSeqiXP_535509.2. XM_535509.5.

Genome annotation databases

EnsembliENSCAFT00000026989; ENSCAFP00000025091; ENSCAFG00000017041.
GeneIDi478336.

Similar proteinsi

Entry informationi

Entry nameiE2QYJ3_CANLF
AccessioniPrimary (citable) accession number: E2QYJ3
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: December 20, 2017
This is version 62 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported