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E2QXF3

- RL15_CANFA

UniProt

E2QXF3 - RL15_CANFA

Protein

60S ribosomal protein L15

Gene

RPL15

Organism
Canis familiaris (Dog) (Canis lupus familiaris)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L15
    Gene namesi
    Name:RPL15
    OrganismiCanis familiaris (Dog) (Canis lupus familiaris)
    Taxonomic identifieri9615 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
    ProteomesiUP000002254: Chromosome 23

    Subcellular locationi

    GO - Cellular componenti

    1. cytosolic large ribosomal subunit Source: Ensembl

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 20420460S ribosomal protein L15PRO_0000405588Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei97 – 971PhosphoserineBy similarity
    Modified residuei100 – 1001PhosphoserineBy similarity

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    PRIDEiE2QXF3.

    Interactioni

    Subunit structurei

    Interacts with IFIT1 (via TPR repeats 1-4).By similarity

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2ZKRelectron microscopy8.70m1-204[»]
    ProteinModelPortaliE2QXF3.
    SMRiE2QXF3. Positions 2-204.
    ModBaseiSearch...
    MobiDBiSearch...

    Miscellaneous databases

    EvolutionaryTraceiE2QXF3.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L15e family.Curated

    Phylogenomic databases

    GeneTreeiENSGT00390000005092.
    KOiK02877.
    OMAiSRRAAWK.
    OrthoDBiEOG7M3J1R.
    TreeFamiTF300050.

    Family and domain databases

    Gene3Di3.40.1120.10. 1 hit.
    InterProiIPR024794. Rbsml_L15e_core_dom.
    IPR000439. Ribosomal_L15e.
    IPR020925. Ribosomal_L15e_CS.
    IPR012678. Ribosomal_L23/L15e_core_dom.
    [Graphical view]
    PANTHERiPTHR11847. PTHR11847. 1 hit.
    PfamiPF00827. Ribosomal_L15e. 1 hit.
    [Graphical view]
    SUPFAMiSSF54189. SSF54189. 1 hit.
    PROSITEiPS01194. RIBOSOMAL_L15E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E2QXF3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGAYKYIQEL WRKKQSDVMR FLLRVRCWQY RQLSALHRAP RPTRPDKARR    50
    LGYKAKQGYV IYRIRVRRGG RKRPVPKGAT YGKPVHHGVN QLKFARSLQS 100
    VAEERAGRHC GALRVLNSYW VGEDSTYKFF EVILIDPFHK AIRRNPDTQW 150
    ITKPVHKHRE MRGLTSAGRK SRGLGKGHKF HHTIGGSRRA AWRRRNTLQL 200
    HRYR 204
    Length:204
    Mass (Da):24,146
    Last modified:November 30, 2010 - v1
    Checksum:iA6E3AD1A76C9506F
    GO

    Sequence databases

    RefSeqiXP_005634418.1. XM_005634361.1.
    XP_005634419.1. XM_005634362.1.
    XP_862876.1. XM_857783.3.

    Genome annotation databases

    EnsembliENSCAFT00000009299; ENSCAFP00000008630; ENSCAFG00000005764.
    GeneIDi477046.
    KEGGicfa:477046.

    Cross-referencesi

    Sequence databases

    RefSeqi XP_005634418.1. XM_005634361.1.
    XP_005634419.1. XM_005634362.1.
    XP_862876.1. XM_857783.3.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2ZKR electron microscopy 8.70 m 1-204 [» ]
    ProteinModelPortali E2QXF3.
    SMRi E2QXF3. Positions 2-204.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi E2QXF3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSCAFT00000009299 ; ENSCAFP00000008630 ; ENSCAFG00000005764 .
    GeneIDi 477046.
    KEGGi cfa:477046.

    Organism-specific databases

    CTDi 6138.

    Phylogenomic databases

    GeneTreei ENSGT00390000005092.
    KOi K02877.
    OMAi SRRAAWK.
    OrthoDBi EOG7M3J1R.
    TreeFami TF300050.

    Miscellaneous databases

    EvolutionaryTracei E2QXF3.
    NextBioi 20852595.

    Family and domain databases

    Gene3Di 3.40.1120.10. 1 hit.
    InterProi IPR024794. Rbsml_L15e_core_dom.
    IPR000439. Ribosomal_L15e.
    IPR020925. Ribosomal_L15e_CS.
    IPR012678. Ribosomal_L23/L15e_core_dom.
    [Graphical view ]
    PANTHERi PTHR11847. PTHR11847. 1 hit.
    Pfami PF00827. Ribosomal_L15e. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54189. SSF54189. 1 hit.
    PROSITEi PS01194. RIBOSOMAL_L15E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence, comparative analysis and haplotype structure of the domestic dog."
      Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B., Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C., Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A., Ponting C.P., Galibert F., Smith D.R.
      , deJong P.J., Kirkness E.F., Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A., Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M., Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L., Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J., Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A., Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P., Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L., Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A., Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L., Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N., Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A., Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N., Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S., Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K., Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G., Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E., Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C., Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L., Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C., Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T., Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J., Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J., Marabella R., Maru K., Matthews C., McDonough S., Mehta T., Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K., Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J., Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N., Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K., Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F., Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C., Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S., Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J., Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S., Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S., Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T., Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X., Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.
      Nature 438:803-819(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Boxer.
    2. Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.70 ANGSTROMS).

    Entry informationi

    Entry nameiRL15_CANFA
    AccessioniPrimary (citable) accession number: E2QXF3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 8, 2011
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome, Reference proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3