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Protein

General transcription factor IIH subunit 4

Gene

EAG_13888

Organism
Camponotus floridanus (Florida carpenter ant)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
General transcription factor IIH subunit 4UniRule annotation
Gene namesi
ORF Names:EAG_13888Imported
OrganismiCamponotus floridanus (Florida carpenter ant)Imported
Taxonomic identifieri104421 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaHymenopteraApocritaAculeataVespoideaFormicidaeFormicinaeCamponotus
Proteomesi
  • UP000000311 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Phylogenomic databases

InParanoidiE2AJG8.
KOiK03144.
OMAiYLEQYAH.

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 1 hit.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.
TIGRFAMsiTIGR00625. tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

E2AJG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNTLGGKNL LRPNSLQCKN LHEYLKSRSS DILNKLYHKP PICLAVFREL
60 70 80 90 100
PIIAKHYVMR LLFVEQPVPQ AVIASWCSKL YFEEHQKVVQ VLNDLYVWKE
110 120 130 140 150
ASIPGGLPGW ILNNIFKKNL KIVLLGGGKP WTMSNQLETD SKPRDVAFLD
160 170 180 190 200
SYALERWECV LHYMVGSQQQ EGISADAVRI LLHAGLMKRD EADGSPIITQ
210 220 230 240 250
AGFQFLLLDT ASQVWYFILQ YLDTIEARGL DLVECLTFLF QLNFSTLGKD
260 270 280 290 300
YSTEGMSEGL LTFLQHLREF GLVYQRKRKA GRFYPTRLAL NIATGENKPL
310 320 330 340 350
AKDTDKEGYI VVETNYRVYA YTNSNLQVAL LGLFCEMLYR FPNVVVSILT
360 370 380 390 400
RDSIRQALKS GITASQIVGY LQQHVHSKMI ERGPPILPPT IVDQIKLWEN
410 420 430 440 450
ERNRFLFSEG VLYSQFLSQT DFEVLRDHAL STGVLIWQSE RKRTMVVTKT
460
GHDDVKKFWK RYSKGSS
Length:467
Mass (Da):53,515
Last modified:November 30, 2010 - v1
Checksum:iC5E6419F63A19812
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL439992 Genomic DNA. Translation: EFN66420.1.
RefSeqiXP_011259188.1. XM_011260886.2.

Genome annotation databases

GeneIDi105253092.
KEGGicfo:105253092.

Similar proteinsi

Entry informationi

Entry nameiE2AJG8_CAMFO
AccessioniPrimary (citable) accession number: E2AJG8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: June 7, 2017
This is version 22 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported