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E1Z6F7

- E1Z6F7_CHLVA

UniProt

E1Z6F7 - E1Z6F7_CHLVA

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Protein

Alpha-amylase

Gene
CHLNCDRAFT_29945
Organism
Chlorella variabilis (Green alga)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:CHLNCDRAFT_29945Imported
OrganismiChlorella variabilis (Green alga)
Taxonomic identifieri554065 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaTrebouxiophyceaeChlorellalesChlorellaceaeChlorella
ProteomesiUP000008141: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliE1Z6F7.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR012850. A-amylase_bs_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E1Z6F7-1 [UniParc]FASTAAdd to Basket

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MQACTWTRGH RSPTCRSSAV AHPRRLLARP STVRCSALVE EKTKDAGQGK    50
DGASGEEDAA AALASAPATG LAAVPRPPKL PVAETICMEG FGWDSCKDGH 100
WWKKVETTIP ELQAAGITHL WLPPPSQSVS PQGYLPGQLY NLNSNYGSKE 150
ELESLNKALL LAGIRPVADV VINHRCAQFQ DENGVWNKYG DDPAACRWAI 200
TCDDPVFQGT GNKDSGDDYA AAPDLDHHNP ELRDSLVDWL NWLKTDVGFE 250
GWRFDFIRGY AAKYVKEYIE RTTGPDVFYV GENFVDLRWQ DSNLEYNQDE 300
ARQKLVDFIK GTQYCTLFDF PTKGILQASP AGPLARWPRL LRADGRGKAP 350
GLLGWWPEMA CTFVDNHDTG SSQQHWPFPK LHVMLGYAYI LTHPGIPCLF 400
WEHHYDWGLA DQINKLVALR KRAGIRADSK LEILCAEGDM YVARCNGNVT 450
IKMGPRYDMG GLVPKESDGW KMAAKGQDFA IWEKA 485
Length:485
Mass (Da):54,025
Last modified:November 30, 2010 - v1
Checksum:i16228615AB719370
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL433837 Genomic DNA. Translation: EFN58641.1.
RefSeqiXP_005850743.1. XM_005850681.1.

Genome annotation databases

GeneIDi17357988.
KEGGicvr:CHLNCDRAFT_29945.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL433837 Genomic DNA. Translation: EFN58641.1 .
RefSeqi XP_005850743.1. XM_005850681.1.

3D structure databases

ProteinModelPortali E1Z6F7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 17357988.
KEGGi cvr:CHLNCDRAFT_29945.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR012850. A-amylase_bs_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex."
    Blanc G., Duncan G., Agarkova I., Borodovsky M., Gurnon J., Kuo A., Lindquist E., Lucas S., Pangilinan J., Polle J., Salamov A., Terry A., Yamada T., Dunigan D.D., Grigoriev I.V., Claverie J.M., Van Etten J.L.
    Plant Cell 22:2943-2955(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NC64AImported.

Entry informationi

Entry nameiE1Z6F7_CHLVA
AccessioniPrimary (citable) accession number: E1Z6F7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: July 9, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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