Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E1Z6F7

- E1Z6F7_CHLVA

UniProt

E1Z6F7 - E1Z6F7_CHLVA

Protein

Alpha-amylase

Gene

CHLNCDRAFT_29945

Organism
Chlorella variabilis (Green alga)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:CHLNCDRAFT_29945Imported
    OrganismiChlorella variabilis (Green alga)Imported
    Taxonomic identifieri554065 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeChlorophytaTrebouxiophyceaeChlorellalesChlorellaceaeChlorella
    ProteomesiUP000008141: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliE1Z6F7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR012850. A-amylase_bs_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E1Z6F7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQACTWTRGH RSPTCRSSAV AHPRRLLARP STVRCSALVE EKTKDAGQGK    50
    DGASGEEDAA AALASAPATG LAAVPRPPKL PVAETICMEG FGWDSCKDGH 100
    WWKKVETTIP ELQAAGITHL WLPPPSQSVS PQGYLPGQLY NLNSNYGSKE 150
    ELESLNKALL LAGIRPVADV VINHRCAQFQ DENGVWNKYG DDPAACRWAI 200
    TCDDPVFQGT GNKDSGDDYA AAPDLDHHNP ELRDSLVDWL NWLKTDVGFE 250
    GWRFDFIRGY AAKYVKEYIE RTTGPDVFYV GENFVDLRWQ DSNLEYNQDE 300
    ARQKLVDFIK GTQYCTLFDF PTKGILQASP AGPLARWPRL LRADGRGKAP 350
    GLLGWWPEMA CTFVDNHDTG SSQQHWPFPK LHVMLGYAYI LTHPGIPCLF 400
    WEHHYDWGLA DQINKLVALR KRAGIRADSK LEILCAEGDM YVARCNGNVT 450
    IKMGPRYDMG GLVPKESDGW KMAAKGQDFA IWEKA 485
    Length:485
    Mass (Da):54,025
    Last modified:November 30, 2010 - v1
    Checksum:i16228615AB719370
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL433837 Genomic DNA. Translation: EFN58641.1.
    RefSeqiXP_005850743.1. XM_005850681.1.

    Genome annotation databases

    GeneIDi17357988.
    KEGGicvr:CHLNCDRAFT_29945.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL433837 Genomic DNA. Translation: EFN58641.1 .
    RefSeqi XP_005850743.1. XM_005850681.1.

    3D structure databases

    ProteinModelPortali E1Z6F7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 17357988.
    KEGGi cvr:CHLNCDRAFT_29945.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR012850. A-amylase_bs_C.
    IPR006046. Alpha_amylase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF07821. Alpha-amyl_C2. 1 hit.
    PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00810. Alpha-amyl_C2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The Chlorella variabilis NC64A genome reveals adaptation to photosymbiosis, coevolution with viruses, and cryptic sex."
      Blanc G., Duncan G., Agarkova I., Borodovsky M., Gurnon J., Kuo A., Lindquist E., Lucas S., Pangilinan J., Polle J., Salamov A., Terry A., Yamada T., Dunigan D.D., Grigoriev I.V., Claverie J.M., Van Etten J.L.
      Plant Cell 22:2943-2955(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NC64AImported.

    Entry informationi

    Entry nameiE1Z6F7_CHLVA
    AccessioniPrimary (citable) accession number: E1Z6F7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3