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E1XUL7 (E1XUL7_AMBAR) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

Eliminative cleavage of (1->4)-alpha-D-galacturonan to give oligosaccharides with 4-deoxy-alpha-D-galact-4-enuronosyl groups at their non-reducing ends. RuleBase RU361123

Cofactor

Binds 1 calcium ion. Required for its activity By similarity. RuleBase RU361123

Pathway

Glycan metabolism; pectin degradation; 2-dehydro-3-deoxy-D-gluconate from pectin: step 2/5. RuleBase RU361123

Sequence similarities

Belongs to the polysaccharide lyase 1 family. RuleBase RU361123

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL CBW30991.1
Chain26 – 397372 Potential EMBL CBW30991.1
PRO_5000643447
Chain26 – 397372pollen allergen Amb a 1.3 EMBL CBW30991.1
PRO_5000643448

Sequences

Sequence LengthMass (Da)Tools
E1XUL7 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: C70CE3F56A8F3C1E

FASTA39742,959
        10         20         30         40         50         60 
MGIKQCCYIL YFTLALVALL QPVRSAEGVG EILPSVNETR SLQACEALNI IDKCWRGKAD 

        70         80         90        100        110        120 
WENNRQALAD CAQGFAKGTY GGKWGDVYTV TSNLDDDVAN PKEGTLRFAA AQNRPLWIIF 

       130        140        150        160        170        180 
KNDMVINLNQ ELVVNSDKTI DGRGVKVEII NGGLTLMNVK NIIIHNINIH DVKVLPGGMI 

       190        200        210        220        230        240 
KSNDGPPILR QASDGDTINV AGSSQIWIDH CSLSKSFDGL VDVTLGSTHV TISNCKFTQQ 

       250        260        270        280        290        300 
SKAILLGADD THVQDKGMLA TVAFNMFTDN VDQRMPRCRF GFFQVVNNNY DRWGTYAIGG 

       310        320        330        340        350        360 
SSAPTILCQG NRFLAPDDQM KKNVLARTGT GVAESMAWNW RSDKDLLENG AIFVTSGSDP 

       370        380        390 
VLTPVQSAGM IPAEPGEAAI KLTSSAGVLS CRPGAPC 

« Hide

References

[1]"Isoform analysis of Amb a 1 and Amb a 2."
Nandy A., Mitulski L.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FR669662 mRNA. Translation: CBW30991.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein family/group databases

Allergome24. Amb a 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayUPA00545; UER00824.

Family and domain databases

Gene3D2.160.20.10. 1 hit.
InterProIPR002022. Amb_allergen_dom.
IPR018082. AmbAllergen.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
PfamPF00544. Pec_lyase_C. 1 hit.
[Graphical view]
PRINTSPR00807. AMBALLERGEN.
SMARTSM00656. Amb_all. 1 hit.
[Graphical view]
SUPFAMSSF51126. SSF51126. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1XUL7_AMBAR
AccessionPrimary (citable) accession number: E1XUL7
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: July 9, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)