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E1X488

- E1X488_BACMS

UniProt

E1X488 - E1X488_BACMS

Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Enzyme and pathway databases

    BioCyciBMAR862908:GJBX-2142-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase E1 componentImported
    Gene namesi
    Name:sucAImported
    Ordered Locus Names:BMS_2258Imported
    OrganismiBacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)Imported
    Taxonomic identifieri862908 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBacteriovoracaceaeBacteriovorax
    ProteomesiUP000008963: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK00164.
    OMAiGFTTAPH.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E1X488-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNPIDFSHL SSSDISFIDS LYEDYKRDKD SVDLSWKKFF EGFEFASGTG    50
    ASGGGGDFDE ARLRKEFNVF RLIQSYRARG HLISDTNPIR PRRDRHARIS 100
    LADYGLEESD LDSTFICGEF VNLGPCKLRD IISRMEKLYC GKIGIEYMHS 150
    NDTDIRRWVR EKFEVGADHI DMPLDKKKRI LSKLNEASVF ENFLQTKYTG 200
    QKRFSLEGGD TTIPALDAII NKGSELGAEE FVIGMAHRGR LNVLANIIGK 250
    TYEYIFSEFE GSSLEQQQGQ GDGDVKYHMG FTSVREATTG KDVTLKILPN 300
    PSHLEAVAPV VNGYCRAQID IAYNDESKIV PIIIHGDAAV AGQGIVYETL 350
    QMSELPAYRS GGSIHFVINN QIGFTTDFSD ARSSNYSTSV AKTLNIPIIH 400
    VNGDYPEHVV YACELAMEFR QKFKKDIFID MVCYRKHGHN EGDEPKYTQP 450
    HLYGLISKVK NPRELYLDRL ITSGSINKSL AKEMQDEFKA LLSDRFNNVK 500
    QNVIPKKSSG PHKEWKNLRW SKPEDFETSP STKVSKKELE KVVKAISSTP 550
    EGFKTLRKAQ KLLDLRKKMF ADDTVDWALA ELMAYGTLLT EDANIRFTGQ 600
    DVIRGTFSHR HAKVFDEKTN NAYCGLSEIE KGQGDIYIYN SLLSEYAVLG 650
    FEYGYSQATP RALNIWEAQF GDFSNGAQIM IDQFITAGES KWQRMSNIVM 700
    LLPHGYEGAG PEHSSCRPER FLQMCAEENM VVCNFTTPAN MFHALRRQLK 750
    WEFRKPLVVF TPKSLLRHPL CTSKLEDFTK GGMQELIDDS WVKAKDVKRV 800
    LFCSGKVYYD LLAKQQEENR KDIAIVRLEQ LYPLPANQIK EVFKRYGKAQ 850
    HYWVQEEPMN MGAWTYLLRW RDLVGDFTCI SRKSSASPAS GYAAVHLREQ 900
    QEILDKAFAK 910
    Length:910
    Mass (Da):103,623
    Last modified:November 30, 2010 - v1
    Checksum:iA6FEE03E5DAB6CA7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FQ312005 Genomic DNA. Translation: CBW27060.1.
    RefSeqiYP_005036021.1. NC_016620.1.

    Genome annotation databases

    EnsemblBacteriaiCBW27060; CBW27060; BMS_2258.
    GeneIDi11549691.
    KEGGibmx:BMS_2258.
    PATRICi42740499. VBIBacMar168520_2149.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FQ312005 Genomic DNA. Translation: CBW27060.1 .
    RefSeqi YP_005036021.1. NC_016620.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBW27060 ; CBW27060 ; BMS_2258 .
    GeneIDi 11549691.
    KEGGi bmx:BMS_2258.
    PATRICi 42740499. VBIBacMar168520_2149.

    Phylogenomic databases

    KOi K00164.
    OMAi GFTTAPH.

    Enzyme and pathway databases

    BioCyci BMAR862908:GJBX-2142-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A small predatory core genome in the divergent marine Bacteriovorax marinus SJ and the terrestrial Bdellovibrio bacteriovorus."
      Crossman L.C., Chen H., Cerdeno-Tarraga A.M., Brooks K., Quail M.A., Pineiro S.A., Hobley L., Sockett R.E., Bentley S.D., Parkhill J., Williams H.N., Stine O.C.
      ISME J. 7:148-160(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC BAA-682 / DSM 15412 / SJImported.

    Entry informationi

    Entry nameiE1X488_BACMS
    AccessioniPrimary (citable) accession number: E1X488
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3