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E1X488

- E1X488_BACMS

UniProt

E1X488 - E1X488_BACMS

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Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene
sucA, BMS_2258
Organism
Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBMAR862908:GJBX-2142-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported
Gene namesi
Name:sucAImported
Ordered Locus Names:BMS_2258Imported
OrganismiBacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)Imported
Taxonomic identifieri862908 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBacteriovoracaceaeBacteriovorax
ProteomesiUP000008963: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK00164.
OMAiGFTTAPH.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

E1X488-1 [UniParc]FASTAAdd to Basket

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MKNPIDFSHL SSSDISFIDS LYEDYKRDKD SVDLSWKKFF EGFEFASGTG    50
ASGGGGDFDE ARLRKEFNVF RLIQSYRARG HLISDTNPIR PRRDRHARIS 100
LADYGLEESD LDSTFICGEF VNLGPCKLRD IISRMEKLYC GKIGIEYMHS 150
NDTDIRRWVR EKFEVGADHI DMPLDKKKRI LSKLNEASVF ENFLQTKYTG 200
QKRFSLEGGD TTIPALDAII NKGSELGAEE FVIGMAHRGR LNVLANIIGK 250
TYEYIFSEFE GSSLEQQQGQ GDGDVKYHMG FTSVREATTG KDVTLKILPN 300
PSHLEAVAPV VNGYCRAQID IAYNDESKIV PIIIHGDAAV AGQGIVYETL 350
QMSELPAYRS GGSIHFVINN QIGFTTDFSD ARSSNYSTSV AKTLNIPIIH 400
VNGDYPEHVV YACELAMEFR QKFKKDIFID MVCYRKHGHN EGDEPKYTQP 450
HLYGLISKVK NPRELYLDRL ITSGSINKSL AKEMQDEFKA LLSDRFNNVK 500
QNVIPKKSSG PHKEWKNLRW SKPEDFETSP STKVSKKELE KVVKAISSTP 550
EGFKTLRKAQ KLLDLRKKMF ADDTVDWALA ELMAYGTLLT EDANIRFTGQ 600
DVIRGTFSHR HAKVFDEKTN NAYCGLSEIE KGQGDIYIYN SLLSEYAVLG 650
FEYGYSQATP RALNIWEAQF GDFSNGAQIM IDQFITAGES KWQRMSNIVM 700
LLPHGYEGAG PEHSSCRPER FLQMCAEENM VVCNFTTPAN MFHALRRQLK 750
WEFRKPLVVF TPKSLLRHPL CTSKLEDFTK GGMQELIDDS WVKAKDVKRV 800
LFCSGKVYYD LLAKQQEENR KDIAIVRLEQ LYPLPANQIK EVFKRYGKAQ 850
HYWVQEEPMN MGAWTYLLRW RDLVGDFTCI SRKSSASPAS GYAAVHLREQ 900
QEILDKAFAK 910
Length:910
Mass (Da):103,623
Last modified:November 30, 2010 - v1
Checksum:iA6FEE03E5DAB6CA7
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FQ312005 Genomic DNA. Translation: CBW27060.1.
RefSeqiYP_005036021.1. NC_016620.1.

Genome annotation databases

EnsemblBacteriaiCBW27060; CBW27060; BMS_2258.
GeneIDi11549691.
KEGGibmx:BMS_2258.
PATRICi42740499. VBIBacMar168520_2149.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FQ312005 Genomic DNA. Translation: CBW27060.1 .
RefSeqi YP_005036021.1. NC_016620.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBW27060 ; CBW27060 ; BMS_2258 .
GeneIDi 11549691.
KEGGi bmx:BMS_2258.
PATRICi 42740499. VBIBacMar168520_2149.

Phylogenomic databases

KOi K00164.
OMAi GFTTAPH.

Enzyme and pathway databases

BioCyci BMAR862908:GJBX-2142-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A small predatory core genome in the divergent marine Bacteriovorax marinus SJ and the terrestrial Bdellovibrio bacteriovorus."
    Crossman L.C., Chen H., Cerdeno-Tarraga A.M., Brooks K., Quail M.A., Pineiro S.A., Hobley L., Sockett R.E., Bentley S.D., Parkhill J., Williams H.N., Stine O.C.
    ISME J. 7:148-160(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-682 / DSM 15412 / SJ.

Entry informationi

Entry nameiE1X488_BACMS
AccessioniPrimary (citable) accession number: E1X488
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: June 11, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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