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E1X488 (E1X488_BACMS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:sucA EMBL CBW27060.1
Ordered Locus Names:BMS_2258 EMBL CBW27060.1
OrganismBacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) [Complete proteome] [HAMAP] EMBL CBW27060.1
Taxonomic identifier862908 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBacteriovoracaceaeBacteriovorax

Protein attributes

Sequence length910 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E1X488 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: A6FEE03E5DAB6CA7

FASTA910103,623
        10         20         30         40         50         60 
MKNPIDFSHL SSSDISFIDS LYEDYKRDKD SVDLSWKKFF EGFEFASGTG ASGGGGDFDE 

        70         80         90        100        110        120 
ARLRKEFNVF RLIQSYRARG HLISDTNPIR PRRDRHARIS LADYGLEESD LDSTFICGEF 

       130        140        150        160        170        180 
VNLGPCKLRD IISRMEKLYC GKIGIEYMHS NDTDIRRWVR EKFEVGADHI DMPLDKKKRI 

       190        200        210        220        230        240 
LSKLNEASVF ENFLQTKYTG QKRFSLEGGD TTIPALDAII NKGSELGAEE FVIGMAHRGR 

       250        260        270        280        290        300 
LNVLANIIGK TYEYIFSEFE GSSLEQQQGQ GDGDVKYHMG FTSVREATTG KDVTLKILPN 

       310        320        330        340        350        360 
PSHLEAVAPV VNGYCRAQID IAYNDESKIV PIIIHGDAAV AGQGIVYETL QMSELPAYRS 

       370        380        390        400        410        420 
GGSIHFVINN QIGFTTDFSD ARSSNYSTSV AKTLNIPIIH VNGDYPEHVV YACELAMEFR 

       430        440        450        460        470        480 
QKFKKDIFID MVCYRKHGHN EGDEPKYTQP HLYGLISKVK NPRELYLDRL ITSGSINKSL 

       490        500        510        520        530        540 
AKEMQDEFKA LLSDRFNNVK QNVIPKKSSG PHKEWKNLRW SKPEDFETSP STKVSKKELE 

       550        560        570        580        590        600 
KVVKAISSTP EGFKTLRKAQ KLLDLRKKMF ADDTVDWALA ELMAYGTLLT EDANIRFTGQ 

       610        620        630        640        650        660 
DVIRGTFSHR HAKVFDEKTN NAYCGLSEIE KGQGDIYIYN SLLSEYAVLG FEYGYSQATP 

       670        680        690        700        710        720 
RALNIWEAQF GDFSNGAQIM IDQFITAGES KWQRMSNIVM LLPHGYEGAG PEHSSCRPER 

       730        740        750        760        770        780 
FLQMCAEENM VVCNFTTPAN MFHALRRQLK WEFRKPLVVF TPKSLLRHPL CTSKLEDFTK 

       790        800        810        820        830        840 
GGMQELIDDS WVKAKDVKRV LFCSGKVYYD LLAKQQEENR KDIAIVRLEQ LYPLPANQIK 

       850        860        870        880        890        900 
EVFKRYGKAQ HYWVQEEPMN MGAWTYLLRW RDLVGDFTCI SRKSSASPAS GYAAVHLREQ 

       910 
QEILDKAFAK 

« Hide

References

[1]"A small predatory core genome in the divergent marine Bacteriovorax marinus SJ and the terrestrial Bdellovibrio bacteriovorus."
Crossman L.C., Chen H., Cerdeno-Tarraga A.M., Brooks K., Quail M.A., Pineiro S.A., Hobley L., Sockett R.E., Bentley S.D., Parkhill J., Williams H.N., Stine O.C.
ISME J. 7:148-160(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-682 / DSM 15412 / SJ.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ312005 Genomic DNA. Translation: CBW27060.1.
RefSeqYP_005036021.1. NC_016620.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBW27060; CBW27060; BMS_2258.
GeneID11549691.
KEGGbmx:BMS_2258.
PATRIC42740499. VBIBacMar168520_2149.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00164.
OMAGFTTAPH.

Enzyme and pathway databases

BioCycBMAR862908:GJBX-2142-MONOMER.

Family and domain databases

Gene3D3.40.50.970. 2 hits.
InterProIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52518. SSF52518. 2 hits.
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1X488_BACMS
AccessionPrimary (citable) accession number: E1X488
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: June 11, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)