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Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciBMAR862908:GJBX-2142-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported
Gene namesi
Name:sucAImported
Ordered Locus Names:BMS_2258Imported
OrganismiBacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ)Imported
Taxonomic identifieri862908 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaBdellovibrionalesBacteriovoracaceaeBacteriovorax
ProteomesiUP000008963: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK00164.
OMAiEHSNARP.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

E1X488-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNPIDFSHL SSSDISFIDS LYEDYKRDKD SVDLSWKKFF EGFEFASGTG
60 70 80 90 100
ASGGGGDFDE ARLRKEFNVF RLIQSYRARG HLISDTNPIR PRRDRHARIS
110 120 130 140 150
LADYGLEESD LDSTFICGEF VNLGPCKLRD IISRMEKLYC GKIGIEYMHS
160 170 180 190 200
NDTDIRRWVR EKFEVGADHI DMPLDKKKRI LSKLNEASVF ENFLQTKYTG
210 220 230 240 250
QKRFSLEGGD TTIPALDAII NKGSELGAEE FVIGMAHRGR LNVLANIIGK
260 270 280 290 300
TYEYIFSEFE GSSLEQQQGQ GDGDVKYHMG FTSVREATTG KDVTLKILPN
310 320 330 340 350
PSHLEAVAPV VNGYCRAQID IAYNDESKIV PIIIHGDAAV AGQGIVYETL
360 370 380 390 400
QMSELPAYRS GGSIHFVINN QIGFTTDFSD ARSSNYSTSV AKTLNIPIIH
410 420 430 440 450
VNGDYPEHVV YACELAMEFR QKFKKDIFID MVCYRKHGHN EGDEPKYTQP
460 470 480 490 500
HLYGLISKVK NPRELYLDRL ITSGSINKSL AKEMQDEFKA LLSDRFNNVK
510 520 530 540 550
QNVIPKKSSG PHKEWKNLRW SKPEDFETSP STKVSKKELE KVVKAISSTP
560 570 580 590 600
EGFKTLRKAQ KLLDLRKKMF ADDTVDWALA ELMAYGTLLT EDANIRFTGQ
610 620 630 640 650
DVIRGTFSHR HAKVFDEKTN NAYCGLSEIE KGQGDIYIYN SLLSEYAVLG
660 670 680 690 700
FEYGYSQATP RALNIWEAQF GDFSNGAQIM IDQFITAGES KWQRMSNIVM
710 720 730 740 750
LLPHGYEGAG PEHSSCRPER FLQMCAEENM VVCNFTTPAN MFHALRRQLK
760 770 780 790 800
WEFRKPLVVF TPKSLLRHPL CTSKLEDFTK GGMQELIDDS WVKAKDVKRV
810 820 830 840 850
LFCSGKVYYD LLAKQQEENR KDIAIVRLEQ LYPLPANQIK EVFKRYGKAQ
860 870 880 890 900
HYWVQEEPMN MGAWTYLLRW RDLVGDFTCI SRKSSASPAS GYAAVHLREQ
910
QEILDKAFAK
Length:910
Mass (Da):103,623
Last modified:November 30, 2010 - v1
Checksum:iA6FEE03E5DAB6CA7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ312005 Genomic DNA. Translation: CBW27060.1.
RefSeqiYP_005036021.1. NC_016620.1.

Genome annotation databases

EnsemblBacteriaiCBW27060; CBW27060; BMS_2258.
GeneIDi11549691.
KEGGibmx:BMS_2258.
PATRICi42740499. VBIBacMar168520_2149.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ312005 Genomic DNA. Translation: CBW27060.1.
RefSeqiYP_005036021.1. NC_016620.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBW27060; CBW27060; BMS_2258.
GeneIDi11549691.
KEGGibmx:BMS_2258.
PATRICi42740499. VBIBacMar168520_2149.

Phylogenomic databases

KOiK00164.
OMAiEHSNARP.

Enzyme and pathway databases

BioCyciBMAR862908:GJBX-2142-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "A small predatory core genome in the divergent marine Bacteriovorax marinus SJ and the terrestrial Bdellovibrio bacteriovorus."
    Crossman L.C., Chen H., Cerdeno-Tarraga A.M., Brooks K., Quail M.A., Pineiro S.A., Hobley L., Sockett R.E., Bentley S.D., Parkhill J., Williams H.N., Stine O.C.
    ISME J. 7:148-160(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-682 / DSM 15412 / SJImported.

Entry informationi

Entry nameiE1X488_BACMS
AccessioniPrimary (citable) accession number: E1X488
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: February 4, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.