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E1WY06 (E1WY06_BACMS) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length375 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site351Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2711Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1371Substrate By similarity HAMAP-Rule MF_01201
Binding site3171Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue351N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
E1WY06 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: D13D3306B5D76302

FASTA37542,675
        10         20         30         40         50         60 
MRFRSRHFIS FEKLENNYKK LKEICVDNKI IFMVKANAYG HGVIPIVRHS VEKLGITEFG 

        70         80         90        100        110        120 
CASLGEALLL REELYDLEFE IYVFSDVQVE LRECAEIYLN RRIIPVISNR DDLDFILNSR 

       130        140        150        160        170        180 
EFENFPLFIK FNTGMNRLGL EMDKVDEVIR SIRVSGRKSI YHLMTHLSSS SLPIKKNKRN 

       190        200        210        220        230        240 
IIQFENFEKI KKAFSDAGIE VERTSIANSG AIEQGAGLGE THVRPGLMMY GPSSMLPQYS 

       250        260        270        280        290        300 
DLSLWSGEII SKLETYVISI FDVEKGQPVG YGATPCPSKG KVAIVALGYG DGFTTRYIGT 

       310        320        330        340        350        360 
HLYHKDIKGK VVGRVNMDMA QVFFDENSLP DLKVGDSFTL WDHSAERFAE FCKEAKIIPY 

       370 
EVFIGITQRV PKIYS 

« Hide

References

[1]"A small predatory core genome in the divergent marine Bacteriovorax marinus SJ and the terrestrial Bdellovibrio bacteriovorus."
Crossman L.C., Chen H., Cerdeno-Tarraga A.M., Brooks K., Quail M.A., Pineiro S.A., Hobley L., Sockett R.E., Bentley S.D., Parkhill J., Williams H.N., Stine O.C.
ISME J. 7:148-160(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-682 / DSM 15412 / SJ.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ312005 Genomic DNA. Translation: CBW27561.1.
RefSeqYP_005036519.1. NC_016620.1.

3D structure databases

ProteinModelPortalE1WY06.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBW27561; CBW27561; BMS_2785.
GeneID11550197.
KEGGbmx:BMS_2785.
PATRIC42741533. VBIBacMar168520_2661.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMACAYENIV.

Enzyme and pathway databases

BioCycBMAR862908:GJBX-2648-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1WY06_BACMS
AccessionPrimary (citable) accession number: E1WY06
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: February 19, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)