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Protein
Submitted name:

Putative alpha-amylase

Gene

BF638R_3074

Organism
Bacteroides fragilis (strain 638R)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei232 – 2321NucleophileUniRule annotation
Active sitei262 – 2621Proton donorUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciBFRA862962:GHND-2976-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:BF638R_3074Imported
OrganismiBacteroides fragilis (strain 638R)Imported
Taxonomic identifieri862962 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000008560 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE1WT49.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.
OMAiFFHWYYP.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E1WT49-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MENGVMMQYF EWNLPNDGNL WKQLKEDASH LHEIGVTAVW IPPAYKADEQ
60 70 80 90 100
QDEGYATYDL YDLGEFDQKG TVRTKYGTKE ELKEMIDELH KNHISVYLDV
110 120 130 140 150
VLNHKAGGDF TEKFIVVEVD PNDRTQALGK PFEIQGWTGY SFHGRKDKYS
160 170 180 190 200
DFKWHWYHFS GTGFNDAKKR SGIFQIQGEG KAWSEGVDNE NGNYDFLLCN
210 220 230 240 250
DIDLDHPEVV TELNRWGKWV SKELNLDGMR LDAIKHMKDK FIAQFLDAVR
260 270 280 290 300
SERGDKFYAV GEYWNGDLNT LDAYIKSVGH KVNLFDVPLH YNLFQASQEG
310 320 330 340 350
KNYDLQNILK NTLVEHHCDL AVTFVDNHDS QSGSSLESQI EDWFKPLAYG
360 370 380 390 400
LILLMKDGYP CLFYGDYYGV KGENSPHTQI INILLDTRRK YAYGDQIEYF
410 420 430 440 450
DHPSAIGFIR TGDEEHVGSG LVFLMSNDEA GSKKMDLGEE HKGEIWHEIT
460 470 480
GNIQQEITLD EKGSGEFSVN TRNIAVWIKK N
Length:481
Mass (Da):55,327
Last modified:November 30, 2010 - v1
Checksum:iA8CBA43DEED6B6E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ312004 Genomic DNA. Translation: CBW23549.1.
RefSeqiWP_014299186.1. NC_016776.1.

Genome annotation databases

EnsemblBacteriaiCBW23549; CBW23549; BF638R_3074.
KEGGibfg:BF638R_3074.
PATRICi42749224. VBIBacFra167533_3159.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ312004 Genomic DNA. Translation: CBW23549.1.
RefSeqiWP_014299186.1. NC_016776.1.

3D structure databases

ProteinModelPortaliE1WT49.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBW23549; CBW23549; BF638R_3074.
KEGGibfg:BF638R_3074.
PATRICi42749224. VBIBacFra167533_3159.

Phylogenomic databases

KOiK01176.
OMAiFFHWYYP.

Enzyme and pathway databases

BioCyciBFRA862962:GHND-2976-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis."
    Patrick S., Blakely G.W., Houston S., Moore J., Abratt V.R., Bertalan M., Cerdeno-Tarraga A.M., Quail M.A., Corton N., Corton C., Bignell A., Barron A., Clark L., Bentley S.D., Parkhill J.
    Microbiology 156:3255-3269(2010)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 638RImported.

Entry informationi

Entry nameiE1WT49_BACF6
AccessioniPrimary (citable) accession number: E1WT49
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: July 22, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.