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Protein
Submitted name:

Putative sialidase

Gene

BF638R_3784

Organism
Bacteroides fragilis (strain 638R)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciBFRA862962:GHND-3669-MONOMER.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative sialidaseImported
Gene namesi
Ordered Locus Names:BF638R_3784Imported
OrganismiBacteroides fragilis (strain 638R)Imported
Taxonomic identifieri862962 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
Proteomesi
  • UP000008560 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 124123BNR_assoc_NInterPro annotationAdd
BLAST
Domaini166 – 499334SialidasesInterPro annotationAdd
BLAST

Phylogenomic databases

KOiK01186.
OMAiNGRRICV.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 2 hits.
PfamiPF13088. BNR_2. 1 hit.
PF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

E1WMX5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVIVRQPIV PVLTKKEINP VLQLKLIKSC PGPCFVKEIG LSLKGTTLLT
60 70 80 90 100
DLTHLSLYRV AGKRGLSDWE KCVDSVAPAL KTVLDTPLEL KSDTTILWVT
110 120 130 140 150
VKLKDKVDLT HRVTVSCDHV TTTCGKASVT SVRPIVALRT GVAVRQRRED
160 170 180 190 200
GVHTSRIPGI TTSLKGTLMA IFDARYDSSR DLQGDIDIAM MRSLDGGMSW
210 220 230 240 250
QPMQIVLDRK KWGGLPEKYN GISDACILTD EKNGTIYVAG LWMYGVLDPR
260 270 280 290 300
SGKWVEGMTQ DSTRWIHQWH AKGSQPGLGV KETCQFLITK SVDDGLTWSD
310 320 330 340 350
PVNITAQTKK PEWWLYAPAP GHGITLKEGT LIFPTQGRDK DGIPFSNITY
360 370 380 390 400
SKDGGKTWIA SKPAYHNTTE CMAVELQDGS VMLNMRDNRN HGNKKVNGRR
410 420 430 440 450
ICVTSDLGST WTEHSTSRKA LIEPTCMASI HRHTYQENGR QKTLLLFCNP
460 470 480 490 500
ESYDSRDHMT LKCSLDDGNT WDSGRKIMLD ELGSFGYSCI TSVNDSTIGV
510 520
FYESSQAQMV FQQIQLKELI GKGKSYKER
Length:529
Mass (Da):58,948
Last modified:November 30, 2010 - v1
Checksum:iCC3D3A1013970F02
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ312004 Genomic DNA. Translation: CBW24233.1.

Genome annotation databases

EnsemblBacteriaiCBW24233; CBW24233; BF638R_3784.
KEGGibfg:BF638R_3784.
PATRICi42750783. VBIBacFra167533_3931.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ312004 Genomic DNA. Translation: CBW24233.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBW24233; CBW24233; BF638R_3784.
KEGGibfg:BF638R_3784.
PATRICi42750783. VBIBacFra167533_3931.

Phylogenomic databases

KOiK01186.
OMAiNGRRICV.

Enzyme and pathway databases

BioCyciBFRA862962:GHND-3669-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 2 hits.
PfamiPF13088. BNR_2. 1 hit.
PF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis."
    Patrick S., Blakely G.W., Houston S., Moore J., Abratt V.R., Bertalan M., Cerdeno-Tarraga A.M., Quail M.A., Corton N., Corton C., Bignell A., Barron A., Clark L., Bentley S.D., Parkhill J.
    Microbiology 156:3255-3269(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 638RImported.

Entry informationi

Entry nameiE1WMX5_BACF6
AccessioniPrimary (citable) accession number: E1WMX5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: July 6, 2016
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.