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E1WMX5 (E1WMX5_BACF6) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BF638R_3784 EMBL CBW24233.1
OrganismBacteroides fragilis (strain 638R) [Complete proteome] [HAMAP] EMBL CBW24233.1
Taxonomic identifier862962 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides

Protein attributes

Sequence length529 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E1WMX5 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: CC3D3A1013970F02

FASTA52958,948
        10         20         30         40         50         60 
MKVIVRQPIV PVLTKKEINP VLQLKLIKSC PGPCFVKEIG LSLKGTTLLT DLTHLSLYRV 

        70         80         90        100        110        120 
AGKRGLSDWE KCVDSVAPAL KTVLDTPLEL KSDTTILWVT VKLKDKVDLT HRVTVSCDHV 

       130        140        150        160        170        180 
TTTCGKASVT SVRPIVALRT GVAVRQRRED GVHTSRIPGI TTSLKGTLMA IFDARYDSSR 

       190        200        210        220        230        240 
DLQGDIDIAM MRSLDGGMSW QPMQIVLDRK KWGGLPEKYN GISDACILTD EKNGTIYVAG 

       250        260        270        280        290        300 
LWMYGVLDPR SGKWVEGMTQ DSTRWIHQWH AKGSQPGLGV KETCQFLITK SVDDGLTWSD 

       310        320        330        340        350        360 
PVNITAQTKK PEWWLYAPAP GHGITLKEGT LIFPTQGRDK DGIPFSNITY SKDGGKTWIA 

       370        380        390        400        410        420 
SKPAYHNTTE CMAVELQDGS VMLNMRDNRN HGNKKVNGRR ICVTSDLGST WTEHSTSRKA 

       430        440        450        460        470        480 
LIEPTCMASI HRHTYQENGR QKTLLLFCNP ESYDSRDHMT LKCSLDDGNT WDSGRKIMLD 

       490        500        510        520 
ELGSFGYSCI TSVNDSTIGV FYESSQAQMV FQQIQLKELI GKGKSYKER 

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References

[1]"Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis."
Patrick S., Blakely G.W., Houston S., Moore J., Abratt V.R., Bertalan M., Cerdeno-Tarraga A.M., Quail M.A., Corton N., Corton C., Bignell A., Barron A., Clark L., Bentley S.D., Parkhill J.
Microbiology 156:3255-3269(2010)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 638R EMBL CBW24233.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ312004 Genomic DNA. Translation: CBW24233.1.
RefSeqYP_005112765.1. NC_016776.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBW24233; CBW24233; BF638R_3784.
GeneID11701556.
KEGGbfg:BF638R_3784.
PATRIC42750783. VBIBacFra167533_3931.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.
OMAWGGLPEK.

Enzyme and pathway databases

BioCycBFRA862962:GHND-3669-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR029456. Sialidase_N.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF14873. BNR_assoc_N. 1 hit.
[Graphical view]
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1WMX5_BACF6
AccessionPrimary (citable) accession number: E1WMX5
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: June 11, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)