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E1WKP2 (E1WKP2_BACF6) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL CBW21055.1
Gene names
Name:gadB EMBL CBW21055.1
Ordered Locus Names:BF638R_0459 EMBL CBW21055.1
OrganismBacteroides fragilis (strain 638R) [Complete proteome] [HAMAP] EMBL CBW21055.1
Taxonomic identifier862962 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides

Protein attributes

Sequence length480 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
E1WKP2 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: 2D028490E1BA5B09

FASTA48054,594
        10         20         30         40         50         60 
MEDLNFRKGD AKTEAFGSNR MLQPSPVEKI PDGPTTPEIA YQMVKDETFA QTQPRLNLAT 

        70         80         90        100        110        120 
FVTTYMDDYA TKLMNEAINI NYIDETEYPR IAVMNGKCIN IVANLWNSPE KDTWKTGALA 

       130        140        150        160        170        180 
IGSSEACMLG GVAAWLRWRK KRQAQGKPFD KPNFVISTGF QVVWEKFAQL WQIEMRQVPL 

       190        200        210        220        230        240 
TLDKTTLDPE EALKMCDENT ICVVPIQGVT WTGLNDDVEA LDKALDAYNA KTGYDIPIHV 

       250        260        270        280        290        300 
DAASGGFILP FLYPDTKWDF RLKWVLSISV SGHKFGLVYP GLGWVVWKGK EYLPEEMAFS 

       310        320        330        340        350        360 
VNYLGANITQ VGLNFSRPAA QILGQYYQFI RLGFQGYKEV QYNSLQIAKY IHSQIAKMTP 

       370        380        390        400        410        420 
FVNYSEDVVN PLFIWYMKPE YAKNAKWTLY DLQDKLAQHG WMVPAYTLPA KLQDYVVMRV 

       430        440        450        460        470        480 
VVRQGFSRDM ADMLLGDIKN AIAELEKLEY PTSTRIAQEK NLPVEAKVFN HTGKPQAAKK 

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References

[1]"Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis."
Patrick S., Blakely G.W., Houston S., Moore J., Abratt V.R., Bertalan M., Cerdeno-Tarraga A.M., Quail M.A., Corton N., Corton C., Bignell A., Barron A., Clark L., Bentley S.D., Parkhill J.
Microbiology 156:3255-3269(2010)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 638R EMBL CBW21055.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ312004 Genomic DNA. Translation: CBW21055.1.
RefSeqYP_005109606.1. NC_016776.1.

3D structure databases

ProteinModelPortalE1WKP2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBW21055; CBW21055; BF638R_0459.
GeneID11705300.
KEGGbfg:BF638R_0459.
PATRIC42743784. VBIBacFra167533_0471.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.
OMAPTFQINF.

Enzyme and pathway databases

BioCycBFRA862962:GHND-441-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1WKP2_BACF6
AccessionPrimary (citable) accession number: E1WKP2
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: May 14, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)