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E1WKP2

- E1WKP2_BACF6

UniProt

E1WKP2 - E1WKP2_BACF6

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Protein

Glutamate decarboxylase

Gene

gadB

Organism
Bacteroides fragilis (strain 638R)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBFRA862962:GHND-441-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:gadBImported
Ordered Locus Names:BF638R_0459Imported
OrganismiBacteroides fragilis (strain 638R)Imported
Taxonomic identifieri862962 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesBacteroidaceaeBacteroides
ProteomesiUP000008560: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE1WKP2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiPTFQINF.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

E1WKP2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MEDLNFRKGD AKTEAFGSNR MLQPSPVEKI PDGPTTPEIA YQMVKDETFA
60 70 80 90 100
QTQPRLNLAT FVTTYMDDYA TKLMNEAINI NYIDETEYPR IAVMNGKCIN
110 120 130 140 150
IVANLWNSPE KDTWKTGALA IGSSEACMLG GVAAWLRWRK KRQAQGKPFD
160 170 180 190 200
KPNFVISTGF QVVWEKFAQL WQIEMRQVPL TLDKTTLDPE EALKMCDENT
210 220 230 240 250
ICVVPIQGVT WTGLNDDVEA LDKALDAYNA KTGYDIPIHV DAASGGFILP
260 270 280 290 300
FLYPDTKWDF RLKWVLSISV SGHKFGLVYP GLGWVVWKGK EYLPEEMAFS
310 320 330 340 350
VNYLGANITQ VGLNFSRPAA QILGQYYQFI RLGFQGYKEV QYNSLQIAKY
360 370 380 390 400
IHSQIAKMTP FVNYSEDVVN PLFIWYMKPE YAKNAKWTLY DLQDKLAQHG
410 420 430 440 450
WMVPAYTLPA KLQDYVVMRV VVRQGFSRDM ADMLLGDIKN AIAELEKLEY
460 470 480
PTSTRIAQEK NLPVEAKVFN HTGKPQAAKK
Length:480
Mass (Da):54,594
Last modified:November 30, 2010 - v1
Checksum:i2D028490E1BA5B09
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ312004 Genomic DNA. Translation: CBW21055.1.
RefSeqiYP_005109606.1. NC_016776.1.

Genome annotation databases

EnsemblBacteriaiCBW21055; CBW21055; BF638R_0459.
GeneIDi11705300.
KEGGibfg:BF638R_0459.
PATRICi42743784. VBIBacFra167533_0471.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FQ312004 Genomic DNA. Translation: CBW21055.1 .
RefSeqi YP_005109606.1. NC_016776.1.

3D structure databases

ProteinModelPortali E1WKP2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBW21055 ; CBW21055 ; BF638R_0459 .
GeneIDi 11705300.
KEGGi bfg:BF638R_0459.
PATRICi 42743784. VBIBacFra167533_0471.

Phylogenomic databases

KOi K01580.
OMAi PTFQINF.

Enzyme and pathway databases

BioCyci BFRA862962:GHND-441-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis."
    Patrick S., Blakely G.W., Houston S., Moore J., Abratt V.R., Bertalan M., Cerdeno-Tarraga A.M., Quail M.A., Corton N., Corton C., Bignell A., Barron A., Clark L., Bentley S.D., Parkhill J.
    Microbiology 156:3255-3269(2010)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 638RImported.

Entry informationi

Entry nameiE1WKP2_BACF6
AccessioniPrimary (citable) accession number: E1WKP2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: November 26, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3