E1WKP2 (E1WKP2_BACF6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative glutamate decarboxylase EMBL CBW21055.1
EC=4.1.1.15 EMBL CBW21055.1

Gene names

Name:	gadB EMBL CBW21055.1
Ordered Locus Names:	BF638R_0459 EMBL CBW21055.1

Organism

Bacteroides fragilis (strain 638R) [Complete proteome] [HAMAP]

Taxonomic identifier

862962 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidia › Bacteroidales › Bacteroidaceae › Bacteroides › Bacteroides fragilis

Protein attributes

Sequence length	480 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL CBW21055.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E1WKP2 [UniParc]. Last modified November 30, 2010. Version 1. Checksum: 2D028490E1BA5B09	FASTA	480	54,594
	10 20 30 40 50 60 MEDLNFRKGD AKTEAFGSNR MLQPSPVEKI PDGPTTPEIA YQMVKDETFA QTQPRLNLAT 70 80 90 100 110 120 FVTTYMDDYA TKLMNEAINI NYIDETEYPR IAVMNGKCIN IVANLWNSPE KDTWKTGALA 130 140 150 160 170 180 IGSSEACMLG GVAAWLRWRK KRQAQGKPFD KPNFVISTGF QVVWEKFAQL WQIEMRQVPL 190 200 210 220 230 240 TLDKTTLDPE EALKMCDENT ICVVPIQGVT WTGLNDDVEA LDKALDAYNA KTGYDIPIHV 250 260 270 280 290 300 DAASGGFILP FLYPDTKWDF RLKWVLSISV SGHKFGLVYP GLGWVVWKGK EYLPEEMAFS 310 320 330 340 350 360 VNYLGANITQ VGLNFSRPAA QILGQYYQFI RLGFQGYKEV QYNSLQIAKY IHSQIAKMTP 370 380 390 400 410 420 FVNYSEDVVN PLFIWYMKPE YAKNAKWTLY DLQDKLAQHG WMVPAYTLPA KLQDYVVMRV 430 440 450 460 470 480 VVRQGFSRDM ADMLLGDIKN AIAELEKLEY PTSTRIAQEK NLPVEAKVFN HTGKPQAAKK

References

[1]

"Twenty-eight divergent polysaccharide loci linked to within and amongst strain capsule diversity in three strains of Bacteroides fragilis." Patrick S., Blakely G.W., Houston S., Moore J., Abratt V., Bertalan M., Cerdeno-Tarraga A., Quail M., Corton N., Corton C., Bignell A., Barron A., Clark L., Bentley S.D., Parkhill J. Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 638R.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FQ312004 Genomic DNA. Translation: CBW21055.1.
RefSeq	YP_005109606.1. NC_016776.1.
3D structure databases
ProteinModelPortal	E1WKP2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBW21055; CBW21055; BF638R_0459.
GeneID	11705300.
KEGG	bfg:BF638R_0459.
PATRIC	42743784. VBIBacFra167533_0471.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E1WKP2_BACF6

Accession

Primary (citable) accession number: E1WKP2

Entry history

Integrated into UniProtKB/TrEMBL:	November 30, 2010
Last sequence update:	November 30, 2010
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)