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E1VUN9 (E1VUN9_ARTAR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phenylalanine--tRNA ligase beta subunit HAMAP-Rule MF_00283

EC=6.1.1.20 HAMAP-Rule MF_00283
Alternative name(s):
Phenylalanyl-tRNA synthetase beta subunit HAMAP-Rule MF_00283
Gene names
Name:pheT HAMAP-Rule MF_00283 EMBL CBT75342.1
Ordered Locus Names:AARI_11310 EMBL CBT75342.1
OrganismArthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) [Complete proteome] [HAMAP]
Taxonomic identifier861360 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrococcaceaeArthrobacter

Protein attributes

Sequence length847 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe). SAAS SAAS005121 HAMAP-Rule MF_00283

Cofactor

Binds 2 magnesium ions per tetramer By similarity. HAMAP-Rule MF_00283 SAAS SAAS005121

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. SAAS SAAS005121 HAMAP-Rule MF_00283

Subcellular location

Cytoplasm By similarity SAAS SAAS005121 HAMAP-Rule MF_00283.

Sequence similarities

Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. HAMAP-Rule MF_00283

Contains 1 B5 domain. HAMAP-Rule MF_00283

Contains 1 FDX-ACB domain. HAMAP-Rule MF_00283

Contains 1 tRNA-binding domain. HAMAP-Rule MF_00283

Contains B5 domain. SAAS SAAS005121

Contains Bdomain. SAAS SAAS005121

Contains FDX-ACB domain. SAAS SAAS005121

Contains tRNA-binding domain. SAAS SAAS005121

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain42 – 170129tRNA-binding By similarity HAMAP-Rule MF_00283
Domain428 – 50376B5 By similarity HAMAP-Rule MF_00283
Domain754 – 84794FDX-ACB By similarity HAMAP-Rule MF_00283

Sites

Metal binding4811Magnesium By similarity HAMAP-Rule MF_00283
Metal binding4871Magnesium; via carbonyl oxygen By similarity HAMAP-Rule MF_00283
Metal binding4901Magnesium By similarity HAMAP-Rule MF_00283
Metal binding4911Magnesium By similarity HAMAP-Rule MF_00283

Sequences

Sequence LengthMass (Da)Tools
E1VUN9 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: 4A71A5850EF79367

FASTA84789,599
        10         20         30         40         50         60 
MRIPLSWLRE YAQVPADASA EDVMADLVKV GLEEEDVHRP SDELSGPIVV GQVLSLEKEV 

        70         80         90        100        110        120 
ASNGKTINWC QVRVVPEGTE QTLTGKGIDP TGVQGIVCGA HNFVEGDKVV VTLPGAVLPG 

       130        140        150        160        170        180 
DFKISPRKTY GHTSAGMIAS SRELGIGEDH DGIMVLSNYG LDPEVGTDVL ALFGLDDQAA 

       190        200        210        220        230        240 
EINVTPDRGY CFSIRGVARE YALATGTSFT DPASIVTVSD ASEAGHEVVL ADAAPIYGVP 

       250        260        270        280        290        300 
GCTRFVTREV TGIDPTRPTP RWMASRLQLA GMRSISLVVD ISNYVMLELG APLHFYDADK 

       310        320        330        340        350        360 
LTSAITVRRA NSGEKLTTLD DKERELSVED LLITDESGAI GIAGVMGGAA TEVSDSTSRV 

       370        380        390        400        410        420 
LIEAAHFDTV SIGRSRRRHK LPSEASKRFE RGVDPRIMQI AAQRAVNLLV ELAGGTETAK 

       430        440        450        460        470        480 
ATDAGAVPAD TQIQLPAGFA GALIGVDYTD EQTISALEGI GAAVQQNAEG FLVTAPSWRP 

       490        500        510        520        530        540 
DLDIKEDLVE EVARVIGYDK IPATLPVAPP GRGLTRTQSQ RRRLLQGLAD AGLTEVLNYP 

       550        560        570        580        590        600 
FVSQAQNATF GAAQAGTEVK AVSLANPISK EFRFLRTSLL PGLLETARRN IGRGFRDLAL 

       610        620        630        640        650        660 
YEGGLVFLPG QQLGSSVLPP LGAKPSDEVL AELFNGVPNQ PWHLAAVFTG HEASAAAGFA 

       670        680        690        700        710        720 
PRAWDWADAL DAAHNVADIL GVELEVAQGS HQAFHPGRVA ALKLAGEVVG YAGELHPQLL 

       730        740        750        760        770        780 
KDQDLPARTV AMELDAAALM SAAPAVVVAQ QHLSSQPLAT QDVALVVDQD VVAGDVLATL 

       790        800        810        820        830        840 
REGAGELLED IALFDVYQGQ GIEEGKKSLA FGLRFRAADR TLTADEASEV RAAAVDAAAK 


KFGATQR 

« Hide

References

« Hide 'large scale' references
[1]"The Arthrobacter arilaitensis Re117 genome sequence reveals its genetic adaptation to the surface of cheese."
Monnet C., Loux V., Gibrat J.F., Spinnler E., Barbe V., Vacherie B., Gavory F., Gourbeyre E., Siguier P., Chandler M., Elleuch R., Irlinger F., Vallaeys T.
PLoS ONE 5:E15489-E15489(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 16368 / CIP 108037 / JCM 13566 / Re117.
[2]"Complete genome sequence of Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117)."
Genoscope.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 16368 / CIP 108037 / JCM 13566 / Re117.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ311875 Genomic DNA. Translation: CBT75342.1.
RefSeqYP_003916313.1. NC_014550.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBT75342; CBT75342; AARI_11310.
GeneID9794204.
KEGGaai:AARI_11310.
PATRIC42168925. VBIArtAri166201_1213.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000292086.
KOK01890.
OMAHPGRTAQ.

Enzyme and pathway databases

BioCycAARI861360:GI6T-1216-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.30.56.20. 1 hit.
3.30.70.380. 1 hit.
3.50.40.10. 1 hit.
HAMAPMF_00283. Phe_tRNA_synth_beta1.
InterProIPR005146. B3/B4_tRNA-bd.
IPR009061. DNA-bd_dom_put.
IPR012340. NA-bd_OB-fold.
IPR004532. Phe-tRNA-ligase_IIc_bsu.
IPR020825. Phe-tRNA_synthase_B3/B4.
IPR005121. PheS_beta_Fdx_antiC-bd.
IPR002547. tRNA-bd_dom.
IPR005147. tRNA_synthase_B5-dom.
[Graphical view]
PfamPF03483. B3_4. 1 hit.
PF03484. B5. 1 hit.
PF03147. FDX-ACB. 1 hit.
PF01588. tRNA_bind. 1 hit.
[Graphical view]
SMARTSM00873. B3_4. 1 hit.
SM00874. B5. 1 hit.
SM00896. FDX-ACB. 1 hit.
[Graphical view]
SUPFAMSSF46955. SSF46955. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF54991. SSF54991. 1 hit.
SSF56037. SSF56037. 1 hit.
TIGRFAMsTIGR00472. pheT_bact. 1 hit.
PROSITEPS51483. B5. 1 hit.
PS51447. FDX_ACB. 1 hit.
PS50886. TRBD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE1VUN9_ARTAR
AccessionPrimary (citable) accession number: E1VUN9
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: June 11, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)