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Protein
Submitted name:

PhoD protein

Gene

phoD

Organism
gamma proteobacterium HdN1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciGPRO83406:GIWA-3255-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
PhoD proteinImported
Gene namesi
Name:phoDImported
ORF Names:HDN1F_32050Imported
Organismigamma proteobacterium HdN1Imported
Taxonomic identifieri83406 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteria
ProteomesiUP000002677 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000024995.
KOiK01113.

Family and domain databases

Gene3Di3.60.21.10. 4 hits.
InterProiIPR018946. Alk_phosphatase_PhoD-like.
IPR029052. Metallo-depent_PP-like.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF09423. PhoD. 2 hits.
[Graphical view]
SUPFAMiSSF56300. SSF56300. 3 hits.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1VPP6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRRRDFLKT MAVSAGSVSA AAVLAGCGDH RDKPRNQFTS AERFPQSVAS
60 70 80 90 100
GDPRAASVVL WTRVVGQEGR DAQVGLEVSE REDFAELVVG EYFTAPADHD
110 120 130 140 150
HCLKVRVTEL KAGTTYYYRF QYDGTRSNTG RTRTAPAENA DVAVRFAFVS
160 170 180 190 200
CQDYIGRYYN SYLSILEQDP DFVVFLGDYI YETTGDKRFQ SLGSERNITF
210 220 230 240 250
KDQAGAIRVG TSEDGFWAAA SLGNYRQLYQ TYRQDPLLQQ VHERYPFINT
260 270 280 290 300
WDDHEYADDC WGDNATYYAG AIPETNLERR RLAEQAFFEY TPMDQFSVAG
310 320 330 340 350
NQSDDGESLD AGSTPLYPET RIYRDFRFGR HMHLFMTDFR SYRPDHLIKE
360 370 380 390 400
DAFPGTIVFD QAAVTAWFTE NSRDFAASRA LYTPYIDLAA PEHEARRLAL
410 420 430 440 450
QVSLQTAYEQ AFAEKGLDLV VYASRIQALV SAACQGNVGV SQLHRFVDEA
460 470 480 490 500
LHLDEATIAG LPVGLGYSTM GKTTLFSDVG ARYMVIKPVF DVYAAMIGAL
510 520 530 540 550
NGVPPVYGQA QSDWLEAGLA SATTTWKLVG SPVSFTPLIL DMASPPLDFI
560 570 580 590 600
RPFHELVPEA FRSAFYFDAD DWDGFPIQKQ AMIRGMLGRN GAITLSGDIH
610 620 630 640 650
SSYVCEHPLT ETGKRSIDFT GGAISSGTWA EFLETAAASI DPALVALLPL
660 670 680 690 700
LNQAITQAPT RDPDGSQVRF ASTAEHAVSI VTLNGQKMGV DFFLVPSTEG
710 720 730 740
TGEAEQSVVG TRYYDNPEAW LAKRRKISFE VVDGELFGPI NA
Length:742
Mass (Da):82,232
Last modified:November 30, 2010 - v1
Checksum:iA68192C85945498A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP929140 Genomic DNA. Translation: CBL46788.1.
RefSeqiWP_013263247.1. NC_014366.1.
YP_003812423.1. NC_014366.1.

Genome annotation databases

EnsemblBacteriaiCBL46788; CBL46788; HDN1F_32050.
KEGGigpb:HDN1F_32050.
PATRICi42349685. VBIGamPro61291_3483.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP929140 Genomic DNA. Translation: CBL46788.1.
RefSeqiWP_013263247.1. NC_014366.1.
YP_003812423.1. NC_014366.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBL46788; CBL46788; HDN1F_32050.
KEGGigpb:HDN1F_32050.
PATRICi42349685. VBIGamPro61291_3483.

Phylogenomic databases

HOGENOMiHOG000024995.
KOiK01113.

Enzyme and pathway databases

BioCyciGPRO83406:GIWA-3255-MONOMER.

Family and domain databases

Gene3Di3.60.21.10. 4 hits.
InterProiIPR018946. Alk_phosphatase_PhoD-like.
IPR029052. Metallo-depent_PP-like.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF09423. PhoD. 2 hits.
[Graphical view]
SUPFAMiSSF56300. SSF56300. 3 hits.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Alkane degradation by a new type of denitrifying bacterium with possible involvement of the electron acceptor in substrate activation."
    Widdel F., Rabus R., Grundmann O., Werner I., Schreiber F., Ehrenreich P., Behrends A., Wilkes H., Kube M., Reinhardt R., Zedelius J.
    Environ. Microbiol. 0:0-0(2010)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiE1VPP6_9GAMM
AccessioniPrimary (citable) accession number: E1VPP6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: April 29, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.