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E1VG43 (E1VG43_9GAMM) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:HDN1F_02020 EMBL CBL43785.1
Organismgamma proteobacterium HdN1 [Complete proteome] EMBL CBL43785.1
Taxonomic identifier83406 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteria

Protein attributes

Sequence length558 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E1VG43 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: 6AB7B435B529F9E7

FASTA55862,519
        10         20         30         40         50         60 
MHQDKRPATQ RFAEANMDAM YRIFTVPEAP GSTLGQIDNM ISQNLMGFLQ NHIVAVEKDL 

        70         80         90        100        110        120 
SEVEKDFADA HIPEKPWFVS DQTQFLLDKL VAQSVHTASP SFVGHMTSAL PYFMLPLSRI 

       130        140        150        160        170        180 
MMALNQNLVK IETSKAFTPL ERQVLGMMHR LIYERDDKFY DQWMHKSGHS LGVLCSGGTI 

       190        200        210        220        230        240 
ANMTALWVAR NAMFKPSKGF KGINHTGVFG ALKHHGLEGM AVLVSERGHY SLAKAADVLG 

       250        260        270        280        290        300 
IGRDHLLTVR TDDNNKVNIR KMRQKLEECR SRNIGVMAIV GVCGTSETGT VDPLNDLADL 

       310        320        330        340        350        360 
AEEFGCHYHV DAAWGGATLF SQKYSHILEG IRRADSVTID GHKQLYVPMG AGMVFFKNPT 

       370        380        390        400        410        420 
ALSNIQHHAE YIIRQGSKDL GSHTLEGSRP GMAMLVHSGL RIIGRSGYEI LINEGIEKAR 

       430        440        450        460        470        480 
AFADMVRAEP DFEMITEPEL NILTYRYVPE FVKKKLATAN AREIDHIHDL LNRLTKLIQK 

       490        500        510        520        530        540 
TQRARGKSFV SRTRLTPEKY GHRLTVVFRV VLANPLTNHQ ILRGVLEEQR TIASLEDCQQ 

       550 
LLRQLSEACA EARHVSNG 

« Hide

References

[1]"Alkane degradation by a new type of denitrifying bacterium with possible involvement of the electron acceptor in substrate activation."
Widdel F., Rabus R., Grundmann O., Werner I., Schreiber F., Ehrenreich P., Behrends A., Wilkes H., Kube M., Reinhardt R., Zedelius J.
Environ. Microbiol. 0:0-0(2010)
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP929140 Genomic DNA. Translation: CBL43785.1.
RefSeqYP_003809451.1. NC_014366.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBL43785; CBL43785; HDN1F_02020.
GeneID9699976.
KEGGgpb:HDN1F_02020.
PATRIC42343077. VBIGamPro61291_0221.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000282553.
KOK01580.

Enzyme and pathway databases

BioCycGPRO83406:GIWA-207-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1VG43_9GAMM
AccessionPrimary (citable) accession number: E1VG43
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: January 22, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)