E1VG43 (E1VG43_9GAMM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative glutamate decarboxylase EMBL CBL43785.1

Gene names

ORF Names:

HDN1F_02020 EMBL CBL43785.1

Organism

gamma proteobacterium HdN1 EMBL CBL43785.1

Taxonomic identifier

83406 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › unclassified Gammaproteobacteria › unclassified Gammaproteobacteria (miscellaneous)

Protein attributes

Sequence length	558 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E1VG43 [UniParc]. Last modified November 30, 2010. Version 1. Checksum: 6AB7B435B529F9E7	FASTA	558	62,519
	10 20 30 40 50 60 MHQDKRPATQ RFAEANMDAM YRIFTVPEAP GSTLGQIDNM ISQNLMGFLQ NHIVAVEKDL 70 80 90 100 110 120 SEVEKDFADA HIPEKPWFVS DQTQFLLDKL VAQSVHTASP SFVGHMTSAL PYFMLPLSRI 130 140 150 160 170 180 MMALNQNLVK IETSKAFTPL ERQVLGMMHR LIYERDDKFY DQWMHKSGHS LGVLCSGGTI 190 200 210 220 230 240 ANMTALWVAR NAMFKPSKGF KGINHTGVFG ALKHHGLEGM AVLVSERGHY SLAKAADVLG 250 260 270 280 290 300 IGRDHLLTVR TDDNNKVNIR KMRQKLEECR SRNIGVMAIV GVCGTSETGT VDPLNDLADL 310 320 330 340 350 360 AEEFGCHYHV DAAWGGATLF SQKYSHILEG IRRADSVTID GHKQLYVPMG AGMVFFKNPT 370 380 390 400 410 420 ALSNIQHHAE YIIRQGSKDL GSHTLEGSRP GMAMLVHSGL RIIGRSGYEI LINEGIEKAR 430 440 450 460 470 480 AFADMVRAEP DFEMITEPEL NILTYRYVPE FVKKKLATAN AREIDHIHDL LNRLTKLIQK 490 500 510 520 530 540 TQRARGKSFV SRTRLTPEKY GHRLTVVFRV VLANPLTNHQ ILRGVLEEQR TIASLEDCQQ 550 LLRQLSEACA EARHVSNG

References

[1]

"Alkane degradation by a new type of denitrifying bacterium with possible involvement of the electron acceptor in substrate activation." Widdel F., Rabus R., Grundmann O., Werner I., Schreiber F., Ehrenreich P., Behrends A., Wilkes H., Kube M., Reinhardt R., Zedelius J. Environ. Microbiol. 0:0-0(2010) Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP929140 Genomic DNA. Translation: CBL43785.1.
RefSeq	YP_003809451.1. NC_014366.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBL43785; CBL43785; HDN1F_02020.
GeneID	9699976.
KEGG	gpb:HDN1F_02020.
PATRIC	42343077. VBIGamPro61291_0221.
Phylogenomic databases
HOGENOM	HOG000282553.
KO	K01580.
Enzyme and pathway databases
BioCyc	GPRO83406:GIWA-203-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E1VG43_9GAMM

Accession

Primary (citable) accession number: E1VG43

Entry history

Integrated into UniProtKB/TrEMBL:	November 30, 2010
Last sequence update:	November 30, 2010
Last modified:	April 3, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)