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Protein
Submitted name:

Halomonas elongata DSM 2581, complete genome

Gene

HELO_1562

Organism
Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. lyase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciHELO768066:GJEE-579-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Halomonas elongata DSM 2581, complete genomeImported (EC:4.2.1.52Imported)
Gene namesi
Ordered Locus Names:HELO_1562Imported
OrganismiHalomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)Imported
Taxonomic identifieri768066 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaOceanospirillalesHalomonadaceaeHalomonas
ProteomesiUP000008707 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE1V796.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the DapA family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000147242.
KOiK01714.
OMAiAHGLMVI.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR002220. DapA-like.
[Graphical view]
PANTHERiPTHR12128. PTHR12128. 1 hit.
PfamiPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFiPIRSF001365. DHDPS. 1 hit.
PRINTSiPR00146. DHPICSNTHASE.

Sequencei

Sequence statusi: Complete.

E1V796-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTNDNIFTGC IPALMTPCTP ERKPDYDALV AKGRELIDIG MSAVVYCGSM
60 70 80 90 100
GDWPLLSEAE RQEGVARLVA AGIPTIVGTG AVNSREAVSH ATHAAEVGAQ
110 120 130 140 150
GLMVIPRVLS RGTSAVAQKA HFSAILKAAP NLPAVIYNSP YYGFATRADL
160 170 180 190 200
FFALREEHPN LIGFKEFGGA DDLRYAAENI TSQDDDVTLM VGVDTTVVHG
210 220 230 240 250
FVNCGATGAI TGIGNALPRE VLHLVSLSKQ AARGDVKARR QAQELDAALG
260 270 280 290 300
VLSSFDEGPD LVLYYKHLMV LNGEREYALH FNESDALSDA QRNYVEAQYA
310
LFREWYAQWS ADIRDGH
Length:317
Mass (Da):34,261
Last modified:November 30, 2010 - v1
Checksum:i5EBBDFDEBF0E8938
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN869568 Genomic DNA. Translation: CBV41446.1.
RefSeqiWP_013331318.1. NC_014532.1.
YP_003896631.1. NC_014532.1.

Genome annotation databases

EnsemblBacteriaiCBV41446; CBV41446; HELO_1562.
KEGGihel:HELO_1562.
PATRICi42352260. VBIHalElo161731_0592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN869568 Genomic DNA. Translation: CBV41446.1.
RefSeqiWP_013331318.1. NC_014532.1.
YP_003896631.1. NC_014532.1.

3D structure databases

ProteinModelPortaliE1V796.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBV41446; CBV41446; HELO_1562.
KEGGihel:HELO_1562.
PATRICi42352260. VBIHalElo161731_0592.

Phylogenomic databases

HOGENOMiHOG000147242.
KOiK01714.
OMAiAHGLMVI.

Enzyme and pathway databases

BioCyciHELO768066:GJEE-579-MONOMER.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR002220. DapA-like.
[Graphical view]
PANTHERiPTHR12128. PTHR12128. 1 hit.
PfamiPF00701. DHDPS. 1 hit.
[Graphical view]
PIRSFiPIRSF001365. DHDPS. 1 hit.
PRINTSiPR00146. DHPICSNTHASE.
ProtoNetiSearch...

Publicationsi

  1. "A blueprint of ectoine metabolism from the genome of the industrial producer Halomonas elongata DSM 2581(T)."
    Schwibbert K., Marin-Sanguino A., Bagyan I., Heidrich G., Lentzen G., Seitz H., Rampp M., Schuster S.C., Klenk H.P., Pfeiffer F., Oesterhelt D., Kunte H.J.
    Environ. Microbiol. 13:1973-1994(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9Imported.

Entry informationi

Entry nameiE1V796_HALED
AccessioniPrimary (citable) accession number: E1V796
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: April 29, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.