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Protein
Submitted name:

SodF

Gene

sodF

Organism
Bacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciBAMY692420:GHU2-2093-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
SodFImported (EC:1.15.1.1Imported)
Gene namesi
Name:sodFImported
Ordered Locus Names:BAMF_2004Imported
OrganismiBacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)Imported
Taxonomic identifieri692420 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
Proteomesi
  • UP000006562 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini79 – 15981Sod_Fe_NInterPro annotationAdd
BLAST
Domaini167 – 269103Sod_Fe_CInterPro annotationAdd
BLAST

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiNVVDWRE.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1UV99-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRHAYQTEM LNWCETLKEQ VIQQGRFDRF AAQIDRIFHT LQDDGLTEAE
60 70 80 90 100
WYEQASALYR DISESEEPEE RRAYVPIGKH VLPKLPYSYS ALEPYISREI
110 120 130 140 150
MKLHHTKHHQ SYVDGLNKAE LELKNARQTK QYDLVAHWER QLAFHGAGHY
160 170 180 190 200
LHSIFWFSMN PNGKRRPTGA LFQMIDVSFG SYSAFKEQFS QAAKKVEGVG
210 220 230 240 250
WAILVWAPRS GRLEILAAEK HQHFSQWDII PLLPLDVWEH AYYLQYKNDR
260 270 280
AAYVDQWWNV VDWREAEKRF EQAHRVMWPL Y
Length:281
Mass (Da):33,457
Last modified:November 30, 2010 - v1
Checksum:i8FE4D809B9F4B91D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN597644 Genomic DNA. Translation: CBI43130.1.
RefSeqiWP_013352528.1. NC_014551.1.

Genome annotation databases

EnsemblBacteriaiCBI43130; CBI43130; BAMF_2004.
GeneIDi9780205.
KEGGibao:BAMF_2004.
PATRICi42473170. VBIBacAmy172706_2162.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN597644 Genomic DNA. Translation: CBI43130.1.
RefSeqiWP_013352528.1. NC_014551.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCBI43130; CBI43130; BAMF_2004.
GeneIDi9780205.
KEGGibao:BAMF_2004.
PATRICi42473170. VBIBacAmy172706_2162.

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiNVVDWRE.

Enzyme and pathway databases

BioCyciBAMY692420:GHU2-2093-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42."
    Ruckert C., Blom J., Chen X., Reva O., Borriss R.
    J. Biotechnol. 155:78-85(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393Imported.

Entry informationi

Entry nameiE1UV99_BACAS
AccessioniPrimary (citable) accession number: E1UV99
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: March 16, 2016
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.