Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E1UPG9

- E1UPG9_BACAS

UniProt

E1UPG9 - E1UPG9_BACAS

Protein
Submitted name:

Bacteriophage SPbeta DNA ligase

Gene

ligB

Organism
Bacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBAMY692420:GHU2-1011-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Bacteriophage SPbeta DNA ligaseImported
    Gene namesi
    Name:ligBImported
    Ordered Locus Names:BAMF_0926Imported
    OrganismiBacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)Imported
    Taxonomic identifieri692420 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000006562: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE1UPG9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000049932.
    KOiK01971.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E1UPG9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFISPMLLES AKDPFDSDDY ITEIKFDGIR LLASKDDGRI RLYTRHNNEV    50
    TAKFPELHTL QIPDGTVLDG ELIVPGPTGA GDFEAMMERF QSRRSYHPIV 100
    FCVFDILRLD GVSVTSKPLY ERKELLSGLA LDHPNVKIVD NVAGNGRAVF 150
    ELAKSSGIEG VVMKRANSSY EENKRSDRWL KIVNYEYTDI WITGYRKEDN 200
    AFVLAYEDGA YAGLMEFMPH AERRRFHSER KDVGETDKYV NIEPIKCRVK 250
    HRFKTRKGLL RIPSFDSWKS 270
    Length:270
    Mass (Da):31,049
    Last modified:November 30, 2010 - v1
    Checksum:iB0157FBC830D737A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN597644 Genomic DNA. Translation: CBI42052.1.
    RefSeqiYP_003919522.1. NC_014551.1.

    Genome annotation databases

    EnsemblBacteriaiCBI42052; CBI42052; BAMF_0926.
    GeneIDi9777989.
    KEGGibao:BAMF_0926.
    PATRICi42470836. VBIBacAmy172706_0995.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN597644 Genomic DNA. Translation: CBI42052.1 .
    RefSeqi YP_003919522.1. NC_014551.1.

    3D structure databases

    ProteinModelPortali E1UPG9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBI42052 ; CBI42052 ; BAMF_0926 .
    GeneIDi 9777989.
    KEGGi bao:BAMF_0926.
    PATRICi 42470836. VBIBacAmy172706_0995.

    Phylogenomic databases

    HOGENOMi HOG000049932.
    KOi K01971.

    Enzyme and pathway databases

    BioCyci BAMY692420:GHU2-1011-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Relationship of Bacillus amyloliquefaciens clades associated with strains DSM7T and FZB42: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on their discriminating complete genome sequences."
      Borriss R., Chen X., Rueckert C., Blom J., Becker A., Baumgarth B., Fan B., Pukall R., Schumann P., Sproer C., Junge H., Vater J., Puhler A., Klenk H.P.
      Int. J. Syst. Evol. Microbiol. 0:0-0(2010)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM7.
    2. "Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42."
      Ruckert C., Blom J., Chen X., Reva O., Borriss R.
      J. Biotechnol. 155:78-85(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393Imported.

    Entry informationi

    Entry nameiE1UPG9_BACAS
    AccessioniPrimary (citable) accession number: E1UPG9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3