E1UPG9 (E1UPG9_BACAS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Bacteriophage SPbeta DNA ligase EMBL CBI42052.1

Gene names

Name:	ligB
Ordered Locus Names:	BAMF_0926

Organism

Bacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393) [Complete proteome] [HAMAP]

Taxonomic identifier

692420 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus subtilis group › Bacillus amyloliquefaciens › Bacillus amyloliquefaciens subsp. amyloliquefaciens

Protein attributes

Sequence length	270 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CBI42052.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E1UPG9 [UniParc]. Last modified November 30, 2010. Version 1. Checksum: B0157FBC830D737A	FASTA	270	31,049
	10 20 30 40 50 60 MFISPMLLES AKDPFDSDDY ITEIKFDGIR LLASKDDGRI RLYTRHNNEV TAKFPELHTL 70 80 90 100 110 120 QIPDGTVLDG ELIVPGPTGA GDFEAMMERF QSRRSYHPIV FCVFDILRLD GVSVTSKPLY 130 140 150 160 170 180 ERKELLSGLA LDHPNVKIVD NVAGNGRAVF ELAKSSGIEG VVMKRANSSY EENKRSDRWL 190 200 210 220 230 240 KIVNYEYTDI WITGYRKEDN AFVLAYEDGA YAGLMEFMPH AERRRFHSER KDVGETDKYV 250 260 270 NIEPIKCRVK HRFKTRKGLL RIPSFDSWKS

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Relationship of Bacillus amyloliquefaciens clades associated with strains DSM7T and FZB42: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on their discriminating complete genome sequences." Borriss R., Chen X., Rueckert C., Blom J., Becker A., Baumgarth B., Fan B., Pukall R., Schumann P., Sproer C., Junge H., Vater J., Puhler A., Klenk H.P. Int. J. Syst. Evol. Microbiol. 0:0-0(2010) Cited for: NUCLEOTIDE SEQUENCE. Strain: DSM7.
[2]	"Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42." Ruckert C., Blom J., Chen X., Reva O., Borriss R. J. Biotechnol. 155:78-85(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN597644 Genomic DNA. Translation: CBI42052.1.
RefSeq	YP_003919522.1. NC_014551.1.
3D structure databases
ProteinModelPortal	E1UPG9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBI42052; CBI42052; BAMF_0926.
GeneID	9777989.
KEGG	bao:BAMF_0926.
PATRIC	42470836. VBIBacAmy172706_0995.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000049932.
KO	K01971.
Enzyme and pathway databases
BioCyc	BAMY692420:GHU2-1115-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E1UPG9_BACAS

Accession

Primary (citable) accession number: E1UPG9

Entry history

Integrated into UniProtKB/TrEMBL:	November 30, 2010
Last sequence update:	November 30, 2010
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)