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E1UPG9

- E1UPG9_BACAS

UniProt

E1UPG9 - E1UPG9_BACAS

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Protein
Submitted name:

Bacteriophage SPbeta DNA ligase

Gene
ligB, BAMF_0926
Organism
Bacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBAMY692420:GHU2-1011-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Bacteriophage SPbeta DNA ligaseImported
Gene namesi
Name:ligBImported
Ordered Locus Names:BAMF_0926Imported
OrganismiBacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)Imported
Taxonomic identifieri692420 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000006562: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE1UPG9.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000049932.
KOiK01971.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1UPG9-1 [UniParc]FASTAAdd to Basket

« Hide

MFISPMLLES AKDPFDSDDY ITEIKFDGIR LLASKDDGRI RLYTRHNNEV    50
TAKFPELHTL QIPDGTVLDG ELIVPGPTGA GDFEAMMERF QSRRSYHPIV 100
FCVFDILRLD GVSVTSKPLY ERKELLSGLA LDHPNVKIVD NVAGNGRAVF 150
ELAKSSGIEG VVMKRANSSY EENKRSDRWL KIVNYEYTDI WITGYRKEDN 200
AFVLAYEDGA YAGLMEFMPH AERRRFHSER KDVGETDKYV NIEPIKCRVK 250
HRFKTRKGLL RIPSFDSWKS 270
Length:270
Mass (Da):31,049
Last modified:November 30, 2010 - v1
Checksum:iB0157FBC830D737A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN597644 Genomic DNA. Translation: CBI42052.1.
RefSeqiYP_003919522.1. NC_014551.1.

Genome annotation databases

EnsemblBacteriaiCBI42052; CBI42052; BAMF_0926.
GeneIDi9777989.
KEGGibao:BAMF_0926.
PATRICi42470836. VBIBacAmy172706_0995.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FN597644 Genomic DNA. Translation: CBI42052.1 .
RefSeqi YP_003919522.1. NC_014551.1.

3D structure databases

ProteinModelPortali E1UPG9.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBI42052 ; CBI42052 ; BAMF_0926 .
GeneIDi 9777989.
KEGGi bao:BAMF_0926.
PATRICi 42470836. VBIBacAmy172706_0995.

Phylogenomic databases

HOGENOMi HOG000049932.
KOi K01971.

Enzyme and pathway databases

BioCyci BAMY692420:GHU2-1011-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Relationship of Bacillus amyloliquefaciens clades associated with strains DSM7T and FZB42: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on their discriminating complete genome sequences."
    Borriss R., Chen X., Rueckert C., Blom J., Becker A., Baumgarth B., Fan B., Pukall R., Schumann P., Sproer C., Junge H., Vater J., Puhler A., Klenk H.P.
    Int. J. Syst. Evol. Microbiol. 0:0-0(2010)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM7.
  2. "Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42."
    Ruckert C., Blom J., Chen X., Reva O., Borriss R.
    J. Biotechnol. 155:78-85(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393.

Entry informationi

Entry nameiE1UPG9_BACAS
AccessioniPrimary (citable) accession number: E1UPG9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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