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E1UPG9 (E1UPG9_BACAS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length270 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CBI42052.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E1UPG9 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: B0157FBC830D737A

FASTA27031,049
        10         20         30         40         50         60 
MFISPMLLES AKDPFDSDDY ITEIKFDGIR LLASKDDGRI RLYTRHNNEV TAKFPELHTL 

        70         80         90        100        110        120 
QIPDGTVLDG ELIVPGPTGA GDFEAMMERF QSRRSYHPIV FCVFDILRLD GVSVTSKPLY 

       130        140        150        160        170        180 
ERKELLSGLA LDHPNVKIVD NVAGNGRAVF ELAKSSGIEG VVMKRANSSY EENKRSDRWL 

       190        200        210        220        230        240 
KIVNYEYTDI WITGYRKEDN AFVLAYEDGA YAGLMEFMPH AERRRFHSER KDVGETDKYV 

       250        260        270 
NIEPIKCRVK HRFKTRKGLL RIPSFDSWKS 

« Hide

References

« Hide 'large scale' references
[1]"Relationship of Bacillus amyloliquefaciens clades associated with strains DSM7T and FZB42: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on their discriminating complete genome sequences."
Borriss R., Chen X., Rueckert C., Blom J., Becker A., Baumgarth B., Fan B., Pukall R., Schumann P., Sproer C., Junge H., Vater J., Puhler A., Klenk H.P.
Int. J. Syst. Evol. Microbiol. 0:0-0(2010)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM7.
[2]"Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42."
Ruckert C., Blom J., Chen X., Reva O., Borriss R.
J. Biotechnol. 155:78-85(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN597644 Genomic DNA. Translation: CBI42052.1.
RefSeqYP_003919522.1. NC_014551.1.

3D structure databases

ProteinModelPortalE1UPG9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBI42052; CBI42052; BAMF_0926.
GeneID9777989.
KEGGbao:BAMF_0926.
PATRIC42470836. VBIBacAmy172706_0995.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000049932.
KOK01971.

Enzyme and pathway databases

BioCycBAMY692420:GHU2-1011-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE1UPG9_BACAS
AccessionPrimary (citable) accession number: E1UPG9
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: April 16, 2014
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)