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E1UNK1

- E1UNK1_BACAS

UniProt

E1UNK1 - E1UNK1_BACAS

Protein
Submitted name:

Pectate lyase

Gene

pel

Organism
Bacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pectate lyase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    LyaseUniRule annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Polysaccharide degradationUniRule annotation

    Enzyme and pathway databases

    BioCyciBAMY692420:GHU2-782-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Pectate lyaseImported (EC:4.2.2.2Imported)
    Gene namesi
    Name:pelImported
    Ordered Locus Names:BAMF_0717Imported
    OrganismiBacillus amyloliquefaciens (strain ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393)Imported
    Taxonomic identifieri692420 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000006562: Chromosome

    Subcellular locationi

    Secreted UniRule annotation

    Keywords - Cellular componenti

    SecretedUniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the polysaccharide lyase 1 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000216909.
    KOiK01728.

    Family and domain databases

    Gene3Di2.160.20.10. 1 hit.
    InterProiIPR002022. Amb_allergen_dom.
    IPR012334. Pectin_lyas_fold.
    IPR011050. Pectin_lyase_fold/virulence.
    [Graphical view]
    PfamiPF00544. Pec_lyase_C. 1 hit.
    [Graphical view]
    SMARTiSM00656. Amb_all. 1 hit.
    [Graphical view]
    SUPFAMiSSF51126. SSF51126. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E1UNK1-1 [UniParc]FASTAAdd to Basket

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    MKKMLFMLAV CLCMIPAGVH AADLGRQTLG TNDGWGAASG GTTGGVKASS    50
    SNVYTVSNRK QLVSALGGSA NSTPKIIYIQ GTINMNTNDN NKTLGFNDYK 100
    DPAYDLNAYL KAYDPAKWGK KAPSGTQEDA RQRSQKNQKA RVVIDIPSNT 150
    TIIGSGSNAK VTGGNFNIKN GVDNVIIRNI EFQDAYDYFP QWDPTDGDSG 200
    NWNSEYDNIT INGATHIWID HCTFNDGSNP DSGFPYYYGR KYQHHDGQTD 250
    MANGANYVTL SYNKYNDHDK GSVIGNSDSK TSDEGKLKVT IHHNYYQNIV 300
    QRAPRVRYGQ VHIYNNFYAG SKSAAYPFSY AWGAGHASKI YAQNNVFEVP 350
    GLAADKVISV FSGGKALHED GTLLNGAAIN ASAANGLSQS VGWTPSLHGS 400
    IGSSANVKSD VISNAGAGIL K 421
    Length:421
    Mass (Da):45,306
    Last modified:November 30, 2010 - v1
    Checksum:i78F2388C7FA06B7E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN597644 Genomic DNA. Translation: CBI41843.1.
    RefSeqiWP_013351348.1. NC_014551.1.
    YP_003919313.1. NC_014551.1.

    Genome annotation databases

    EnsemblBacteriaiCBI41843; CBI41843; BAMF_0717.
    GeneIDi9780745.
    KEGGibao:BAMF_0717.
    PATRICi42470338. VBIBacAmy172706_0768.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN597644 Genomic DNA. Translation: CBI41843.1 .
    RefSeqi WP_013351348.1. NC_014551.1.
    YP_003919313.1. NC_014551.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBI41843 ; CBI41843 ; BAMF_0717 .
    GeneIDi 9780745.
    KEGGi bao:BAMF_0717.
    PATRICi 42470338. VBIBacAmy172706_0768.

    Phylogenomic databases

    HOGENOMi HOG000216909.
    KOi K01728.

    Enzyme and pathway databases

    BioCyci BAMY692420:GHU2-782-MONOMER.

    Family and domain databases

    Gene3Di 2.160.20.10. 1 hit.
    InterProi IPR002022. Amb_allergen_dom.
    IPR012334. Pectin_lyas_fold.
    IPR011050. Pectin_lyase_fold/virulence.
    [Graphical view ]
    Pfami PF00544. Pec_lyase_C. 1 hit.
    [Graphical view ]
    SMARTi SM00656. Amb_all. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51126. SSF51126. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Relationship of Bacillus amyloliquefaciens clades associated with strains DSM7T and FZB42: a proposal for Bacillus amyloliquefaciens subsp. amyloliquefaciens subsp. nov. and Bacillus amyloliquefaciens subsp. plantarum subsp. nov. based on their discriminating complete genome sequences."
      Borriss R., Chen X., Rueckert C., Blom J., Becker A., Baumgarth B., Fan B., Pukall R., Schumann P., Sproer C., Junge H., Vater J., Puhler A., Klenk H.P.
      Int. J. Syst. Evol. Microbiol. 0:0-0(2010)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: DSM7.
    2. "Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42."
      Ruckert C., Blom J., Chen X., Reva O., Borriss R.
      J. Biotechnol. 155:78-85(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23350 / DSM 7 / BCRC 11601 / NBRC 15535 / NRRL B-14393Imported.

    Entry informationi

    Entry nameiE1UNK1_BACAS
    AccessioniPrimary (citable) accession number: E1UNK1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3