Skip Header

Contribute Send feedback
Read comments (?) or add your own

E1TKC6 (E1TKC6_BURSG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Transcriptional regulator, GntR family with aminotransferase domain EMBL ADN61052.1
Gene names
Ordered Locus Names:BC1003_5132
OrganismBurkholderia sp. (strain CCGE1003) [Complete proteome] [HAMAP] EMBL ADN61052.1
Taxonomic identifier640512 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia

Protein attributes

Sequence length471 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH gntR-type DNA-binding domain. SAAS SAAS000524 RuleBase RU000706

Sequences

Sequence LengthMass (Da)Tools
E1TKC6 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: 3FD7C308E1FE44E0

FASTA47151,497
        10         20         30         40         50         60 
MIELNLERDR RAAPTLVEQV VQGFAQAIEA QSLRAGALLP SVRQLAQTHE LSTFTVTEAY 

        70         80         90        100        110        120 
NRLVSMGLVV ARRGSGYRVA ARSPAPRAAV TDWQPPSLTA TWLLSDVFAD HSVPIKAGGG 

       130        140        150        160        170        180 
WLPNEWINES GLQHALRAMS RVPAARLGDY GHPYGFAPLR ERIAEQLDRY GLPVDVSNVL 

       190        200        210        220        230        240 
LTQGATQGLD LIVRTLLRAG DAVIVEDPGY CNLLQILKLA GLVVHGVPRT PAGVDTDVLE 

       250        260        270        280        290        300 
ALVAEHKPKA IFVNTTLQNP TGATFGMSAA FRLLQIAERQ RMWVIEDDVS RELAPSGAPL 

       310        320        330        340        350        360 
FAAMEGLQRV LYVGGFSKTV TPGLRCGYVV AERAVLRELA RTKMAVGLTS SEAIERIVDK 

       370        380        390        400        410        420 
VLLEGRYARH VEAVNERLKL AHATVEERLD SLGLEVFHRP RAGLFLWARL AIDAGRAGDI 

       430        440        450        460        470 
ATAALTHGIW LAPGSYFRPD DAPSAWFRFN APYSTDDALW RFIERVQRGA V

« Hide

References

[1]"Complete sequence of chromosome 2 of Burkholderia sp. CCGE1003."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Daligault H., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G. expand/collapse author list , Martinez-Romero E., Rogel M.A., Auchtung J., Tiedje J.M., Woyke T.
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCGE1003.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002218 Genomic DNA. Translation: ADN61052.1.
RefSeqYP_003910343.1. NC_014540.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN61052; ADN61052; BC1003_5132.
GeneID9763848.
KEGGbgf:BC1003_5132.
PATRIC42217128. VBIBurSp98639_5521.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000133005.
OMALWRFIER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
3.40.640.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR000524. Tscrpt_reg_HTH_GntR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
PF00392. GntR. 1 hit.
[Graphical view]
SMARTSM00345. HTH_GNTR. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITEPS50949. HTH_GNTR. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE1TKC6_BURSG
AccessionPrimary (citable) accession number: E1TKC6
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info