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Protein
Submitted name:

ATP dependent DNA ligase

Gene

BC1003_3707

Organism
Burkholderia sp. (strain CCGE1003)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSP640512:GBXV-3776-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:BC1003_3707Imported
OrganismiBurkholderia sp. (strain CCGE1003)Imported
Taxonomic identifieri640512 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000001550 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi640512.BC1003_3707.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK10747.
OMAiGQPYPFF.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1TIT7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRFAALYTA LDATTSTHDK LEALTSYFSI AEPEDAAWAS YFLAGGKPRQ
60 70 80 90 100
SVPTRLLTEF ARERAGLPAW LFEESYHAVG DLAETIAHIL PPAQRSSELG
110 120 130 140 150
LTQWIEQRVL PLRGLAPEEL RTRLFSYWDE LDWSGRFLLT KLIGGGFRVG
160 170 180 190 200
VARQLVVRAL AEVAGIDHKR IAQRMVGWTD SRQKPDAARY LRLIAPEATD
210 220 230 240 250
VAGDDAQHAT ERHDSDLGLP YPFFLAHPLQ TEPGTLGDPS RWLIEWKWDG
260 270 280 290 300
IRAQLVKRAG RVWLWSRGED LITDRFPEVA ALGEALPDGF VIDGEILAWE
310 320 330 340 350
PGAAAPLPFA RLQPRIARKT LTKKVLADSP AALLAYDLLE AHGEDLRMAP
360 370 380 390 400
LIERRARLDS LALSLENPLA RDLLRVSPLV CGADWQALAA LREESRARGV
410 420 430 440 450
EGLMLKERES LYGVGRTKAS GTWWKWKIDP YAVDAVLVYA QRGHGRRASL
460 470 480 490 500
YTDFTFAVWD EANGVRTLVP FAKAYSGLTD EEMRQVDAIV RKTTIEKFGP
510 520 530 540 550
VRSVTPTLVF EIGFEGIQAS SRHKSGVAVR FPRMLRWRTD KHIDDADTLA
560
MLKGFIDDRA A
Length:561
Mass (Da):62,780
Last modified:November 30, 2010 - v1
Checksum:iD0693F63ABD8ED4B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002218 Genomic DNA. Translation: ADN59647.1.
RefSeqiWP_013341184.1. NC_014540.1.
YP_003908938.1. NC_014540.1.

Genome annotation databases

EnsemblBacteriaiADN59647; ADN59647; BC1003_3707.
KEGGibgf:BC1003_3707.
PATRICi42214054. VBIBurSp98639_3989.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002218 Genomic DNA. Translation: ADN59647.1.
RefSeqiWP_013341184.1. NC_014540.1.
YP_003908938.1. NC_014540.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi640512.BC1003_3707.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADN59647; ADN59647; BC1003_3707.
KEGGibgf:BC1003_3707.
PATRICi42214054. VBIBurSp98639_3989.

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK10747.
OMAiGQPYPFF.

Enzyme and pathway databases

BioCyciBSP640512:GBXV-3776-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCGE1003Imported.

Entry informationi

Entry nameiE1TIT7_BURSG
AccessioniPrimary (citable) accession number: E1TIT7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: June 24, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.