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E1TFK5

- E1TFK5_BURSG

UniProt

E1TFK5 - E1TFK5_BURSG

Protein

Xylose isomerase

Gene

xylA

Organism
Burkholderia sp. (strain CCGE1003)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei100 – 1001UniRule annotation
    Active sitei103 – 1031UniRule annotation
    Metal bindingi231 – 2311Magnesium 1UniRule annotation
    Metal bindingi267 – 2671Magnesium 1UniRule annotation
    Metal bindingi267 – 2671Magnesium 2UniRule annotation
    Metal bindingi270 – 2701Magnesium 2UniRule annotation
    Metal bindingi295 – 2951Magnesium 1UniRule annotation
    Metal bindingi306 – 3061Magnesium 2UniRule annotation
    Metal bindingi308 – 3081Magnesium 2UniRule annotation
    Metal bindingi338 – 3381Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciBSP640512:GBXV-4502-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:BC1003_4427Imported
    OrganismiBurkholderia sp. (strain CCGE1003)Imported
    Taxonomic identifieri640512 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000001550: Chromosome 2

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliE1TFK5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000252293.
    KOiK01805.
    OMAiLFHAHIG.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E1TFK5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSYFEHIPEI RYEGPQSDNP LAYRHYDKSK KVLGKTLEEH LRIAVCYWHT    50
    FVWPGVDIFG QGTFRRPWQQ PGDAMEMAHL KADAAFEFFS KLGTPYYTFH 100
    DTDVAPEGTN LHEYSENFSR IVDYLERKQH DTGVKLLWGT ANLFSHPRYA 150
    AGAATSPDPE IFAYAATQVR HALDATQRLG GENYVLWGGR EGYDTLLNTD 200
    LVRERDQLAR FLHMVVEHAH KIGFKGALLI EPKPQEPTKH QYDYDVATVH 250
    GFLLQYGLEK EIRVNIEANH ATLAGHSFHH EIATAYALGV FGSVDANRGD 300
    PQNGWDTDQF PNSVEELTLA FYEILRHGGF TTGGMNFDSK VRRQSVDAED 350
    LFHGHIGAID NLALALERAA VLIGNDRLGE FRRQRYAGWD ADFGRKILSG 400
    DYSLSTLAAE AVSRDLNPQH KSGQQERMEN IVNQAIYSGR 440
    Length:440
    Mass (Da):49,831
    Last modified:November 30, 2010 - v1
    Checksum:iDFB53EA91024B787
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002218 Genomic DNA. Translation: ADN60359.1.
    RefSeqiWP_013341892.1. NC_014540.1.
    YP_003909650.1. NC_014540.1.

    Genome annotation databases

    EnsemblBacteriaiADN60359; ADN60359; BC1003_4427.
    GeneIDi9763154.
    KEGGibgf:BC1003_4427.
    PATRICi42215619. VBIBurSp98639_4766.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002218 Genomic DNA. Translation: ADN60359.1 .
    RefSeqi WP_013341892.1. NC_014540.1.
    YP_003909650.1. NC_014540.1.

    3D structure databases

    ProteinModelPortali E1TFK5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADN60359 ; ADN60359 ; BC1003_4427 .
    GeneIDi 9763154.
    KEGGi bgf:BC1003_4427.
    PATRICi 42215619. VBIBurSp98639_4766.

    Phylogenomic databases

    HOGENOMi HOG000252293.
    KOi K01805.
    OMAi LFHAHIG.

    Enzyme and pathway databases

    BioCyci BSP640512:GBXV-4502-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCGE1003Imported.

    Entry informationi

    Entry nameiE1TFK5_BURSG
    AccessioniPrimary (citable) accession number: E1TFK5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3