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E1TA84 (E1TA84_BURSG) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
dTDP-glucose 4,6-dehydratase RuleBase RU004473

EC=4.2.1.46 RuleBase RU004473
Gene names
Ordered Locus Names:BC1003_0747 EMBL ADN56736.1
OrganismBurkholderia sp. (strain CCGE1003) [Complete proteome] [HAMAP] EMBL ADN56736.1
Taxonomic identifier640512 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

dTDP-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O. RuleBase RU004473

Cofactor

NAD By similarity. RuleBase RU004473

Sequence similarities

Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. RuleBase RU004473

Ontologies

Keywords
   Molecular functionLyase RuleBase RU004473
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processnucleotide-sugar metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncoenzyme binding

Inferred from electronic annotation. Source: InterPro

dTDP-glucose 4,6-dehydratase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E1TA84 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: E2A89FCDFD2ED091

FASTA35339,229
        10         20         30         40         50         60 
MILVTGGAGF IGANFVLDWL NTSDEAVLNV DKLTYAGNLG TLKSQQGNPK HVFVRADICD 

        70         80         90        100        110        120 
RAAMDALFAE HKPRAVLHFA AESHVDRSIH GPADFVQTNV VGTFTLLEAA RSYWNTLGEA 

       130        140        150        160        170        180 
DKAAFRFLHV STDEVFGSLS ATDPQFSETT PYAPNSPYSA TKAGSDHLVR AYHHTYGLPV 

       190        200        210        220        230        240 
LTTNCSNNYG PYQFPEKLIP LMIANALGGK PLPVYGDGQN VRDWLYVGDH CSAIREVLAR 

       250        260        270        280        290        300 
GVPGETYNVG GWNEKKNLEV VHTLCDLLDK LRPKAAGSYR DQITYVKDRP GHDRRYAIDA 

       310        320        330        340        350 
RKLERELGWK PAETFETGLA KTVQWYLDNQ AWSDEVASGE YRKWVETNYA QRA 

« Hide

References

[1]"Complete sequence of chromosome 1 of Burkholderia sp. CCGE1003."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Daligault H., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G. expand/collapse author list , Martinez-Romero E., Rogel M.A., Auchtung J., Tiedje J.M., Woyke T.
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCGE1003.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002217 Genomic DNA. Translation: ADN56736.1.
RefSeqYP_003906027.1. NC_014539.1.

3D structure databases

ProteinModelPortalE1TA84.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN56736; ADN56736; BC1003_0747.
GeneID9765613.
KEGGbgf:BC1003_0747.
PATRIC42207519. VBIBurSp98639_0779.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000168006.
KOK01710.
OMATIDWYRE.

Enzyme and pathway databases

BioCycBSP640512:GBXV-752-MONOMER.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR005888. dTDP_Gluc_deHydtase.
IPR001509. Epimerase_deHydtase.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR10366:SF41. PTHR10366:SF41. 1 hit.
PfamPF01370. Epimerase. 1 hit.
[Graphical view]
TIGRFAMsTIGR01181. dTDP_gluc_dehyt. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1TA84_BURSG
AccessionPrimary (citable) accession number: E1TA84
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: December 11, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)