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E1T7A9

- E1T7A9_BURSG

UniProt

E1T7A9 - E1T7A9_BURSG

Protein
Submitted name:

DNA ligase D

Gene

BC1003_1569

Organism
Burkholderia sp. (strain CCGE1003)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBSP640512:GBXV-1591-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase DImported
    Gene namesi
    Ordered Locus Names:BC1003_1569Imported
    OrganismiBurkholderia sp. (strain CCGE1003)Imported
    Taxonomic identifieri640512 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
    ProteomesiUP000001550: Chromosome 1

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiSACDMAL.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E1T7A9-1 [UniParc]FASTAAdd to Basket

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    MNDRLDLYNR KRRFDETPEP AGTRPAKKRG GRGAAHPEAA EGLSYVIQEH    50
    HARRLHYDFR LELNGALLSW AVPKGPCLDP SVKRLAVHVE DHPVEYGSFE 100
    GEIPPGNYGA GTVIVWDRGT WEPLGGPAEA ARAYRAGKLK FHLHGEKLHG 150
    GWTLVRSHMR GNADKEQWLL IKEPDDEARD ESEYDILAER PGSVLGGESA 200
    PAKAKGKAKG GSRAATGKSQ MASVRGDPKR PDIVATRSNE SLRELAASPA 250
    IEGAVKARLP AALKPQLATL VDATPPGDDW AYEIKFDGYR VLARIDASAK 300
    GHGVQVFTRA GNDWTARFSR QVKAFGQLGL ESAWLDGEAV VLDENGVPSF 350
    QALQNAFDSN RPQDIVVYLF DVPFLNGYDL RGVPLQQRRA ILRALLEPVD 400
    DSVLRFSNDF EFSADDLLKS ACDMALEGII GKRRDSGYVS GRSATWIKLK 450
    CRRRQEFVIG GYSEPSGSRA AFGALLLGVH DSKGKLQYAG RVGTGFDAAL 500
    LRSVKKELDA HETKRMPFAS PPRERSRTPV HWVEPVLVAE CNFAEWTSDG 550
    IVRQASFVSL RKDKPARQIV KEAPRKGDDV QQQTDIEADT APKKRAARSK 600
    GTGKTAAATA DELAEGTAEK NARKPVEPAA KSAAKPAAKA AAKSGASAKR 650
    TATSDTDNDT ENDTHAQSPA SRSRKSASPA EVAGVRISHP DRVIDKSTGA 700
    RKIDLVQYYE SVARWMLPHL ADRPVSLVRA PEDIGGELFF QKHTQKLSIP 750
    NITQHPGLDP GHPPLITVDS VKALVGAAQM GTIEFHTWNG VASNIEKPDR 800
    VVFDLDPDPS LGWERMIEAA LLTRTLLEEL GLTSFCKTSG GKGLHVVVPL 850
    AKHAGWDEVK GFSQAVAQHM ASTLPKYFSA KMGAQNRKQK IFVDYLRNNR 900
    GSSTVAAFSV RARPGLGVSV PLAWDEVAQT TGGDQWNIRN LHERLAQLKS 950
    DPWAEYPKTR QRITAAMRKR LSGA 974
    Length:974
    Mass (Da):106,386
    Last modified:November 30, 2010 - v1
    Checksum:i93EF22410554A6FC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002217 Genomic DNA. Translation: ADN57539.1.
    RefSeqiWP_013339149.1. NC_014539.1.
    YP_003906830.1. NC_014539.1.

    Genome annotation databases

    EnsemblBacteriaiADN57539; ADN57539; BC1003_1569.
    GeneIDi9766451.
    KEGGibgf:BC1003_1569.
    PATRICi42209341. VBIBurSp98639_1676.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002217 Genomic DNA. Translation: ADN57539.1 .
    RefSeqi WP_013339149.1. NC_014539.1.
    YP_003906830.1. NC_014539.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADN57539 ; ADN57539 ; BC1003_1569 .
    GeneIDi 9766451.
    KEGGi bgf:BC1003_1569.
    PATRICi 42209341. VBIBurSp98639_1676.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi SACDMAL.

    Enzyme and pathway databases

    BioCyci BSP640512:GBXV-1591-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCGE1003Imported.

    Entry informationi

    Entry nameiE1T7A9_BURSG
    AccessioniPrimary (citable) accession number: E1T7A9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3