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E1T7A9

- E1T7A9_BURSG

UniProt

E1T7A9 - E1T7A9_BURSG

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Protein
Submitted name: DNA ligase D
Gene
BC1003_1569
Organism
Burkholderia sp. (strain CCGE1003)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSP640512:GBXV-1591-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:BC1003_1569Imported
OrganismiBurkholderia sp. (strain CCGE1003)Imported
Taxonomic identifieri640512 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000001550: Chromosome 1

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiSACDMAL.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1T7A9-1 [UniParc]FASTAAdd to Basket

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MNDRLDLYNR KRRFDETPEP AGTRPAKKRG GRGAAHPEAA EGLSYVIQEH    50
HARRLHYDFR LELNGALLSW AVPKGPCLDP SVKRLAVHVE DHPVEYGSFE 100
GEIPPGNYGA GTVIVWDRGT WEPLGGPAEA ARAYRAGKLK FHLHGEKLHG 150
GWTLVRSHMR GNADKEQWLL IKEPDDEARD ESEYDILAER PGSVLGGESA 200
PAKAKGKAKG GSRAATGKSQ MASVRGDPKR PDIVATRSNE SLRELAASPA 250
IEGAVKARLP AALKPQLATL VDATPPGDDW AYEIKFDGYR VLARIDASAK 300
GHGVQVFTRA GNDWTARFSR QVKAFGQLGL ESAWLDGEAV VLDENGVPSF 350
QALQNAFDSN RPQDIVVYLF DVPFLNGYDL RGVPLQQRRA ILRALLEPVD 400
DSVLRFSNDF EFSADDLLKS ACDMALEGII GKRRDSGYVS GRSATWIKLK 450
CRRRQEFVIG GYSEPSGSRA AFGALLLGVH DSKGKLQYAG RVGTGFDAAL 500
LRSVKKELDA HETKRMPFAS PPRERSRTPV HWVEPVLVAE CNFAEWTSDG 550
IVRQASFVSL RKDKPARQIV KEAPRKGDDV QQQTDIEADT APKKRAARSK 600
GTGKTAAATA DELAEGTAEK NARKPVEPAA KSAAKPAAKA AAKSGASAKR 650
TATSDTDNDT ENDTHAQSPA SRSRKSASPA EVAGVRISHP DRVIDKSTGA 700
RKIDLVQYYE SVARWMLPHL ADRPVSLVRA PEDIGGELFF QKHTQKLSIP 750
NITQHPGLDP GHPPLITVDS VKALVGAAQM GTIEFHTWNG VASNIEKPDR 800
VVFDLDPDPS LGWERMIEAA LLTRTLLEEL GLTSFCKTSG GKGLHVVVPL 850
AKHAGWDEVK GFSQAVAQHM ASTLPKYFSA KMGAQNRKQK IFVDYLRNNR 900
GSSTVAAFSV RARPGLGVSV PLAWDEVAQT TGGDQWNIRN LHERLAQLKS 950
DPWAEYPKTR QRITAAMRKR LSGA 974
Length:974
Mass (Da):106,386
Last modified:November 30, 2010 - v1
Checksum:i93EF22410554A6FC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002217 Genomic DNA. Translation: ADN57539.1.
RefSeqiWP_013339149.1. NC_014539.1.
YP_003906830.1. NC_014539.1.

Genome annotation databases

EnsemblBacteriaiADN57539; ADN57539; BC1003_1569.
GeneIDi9766451.
KEGGibgf:BC1003_1569.
PATRICi42209341. VBIBurSp98639_1676.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002217 Genomic DNA. Translation: ADN57539.1 .
RefSeqi WP_013339149.1. NC_014539.1.
YP_003906830.1. NC_014539.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADN57539 ; ADN57539 ; BC1003_1569 .
GeneIDi 9766451.
KEGGi bgf:BC1003_1569.
PATRICi 42209341. VBIBurSp98639_1676.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi SACDMAL.

Enzyme and pathway databases

BioCyci BSP640512:GBXV-1591-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCGE1003.

Entry informationi

Entry nameiE1T7A9_BURSG
AccessioniPrimary (citable) accession number: E1T7A9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: September 3, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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