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E1T7A9

- E1T7A9_BURSG

UniProt

E1T7A9 - E1T7A9_BURSG

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Protein
Submitted name:

DNA ligase D

Gene

BC1003_1569

Organism
Burkholderia sp. (strain CCGE1003)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSP640512:GBXV-1591-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:BC1003_1569Imported
OrganismiBurkholderia sp. (strain CCGE1003)Imported
Taxonomic identifieri640512 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000001550: Chromosome 1

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiSACDMAL.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1T7A9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNDRLDLYNR KRRFDETPEP AGTRPAKKRG GRGAAHPEAA EGLSYVIQEH
60 70 80 90 100
HARRLHYDFR LELNGALLSW AVPKGPCLDP SVKRLAVHVE DHPVEYGSFE
110 120 130 140 150
GEIPPGNYGA GTVIVWDRGT WEPLGGPAEA ARAYRAGKLK FHLHGEKLHG
160 170 180 190 200
GWTLVRSHMR GNADKEQWLL IKEPDDEARD ESEYDILAER PGSVLGGESA
210 220 230 240 250
PAKAKGKAKG GSRAATGKSQ MASVRGDPKR PDIVATRSNE SLRELAASPA
260 270 280 290 300
IEGAVKARLP AALKPQLATL VDATPPGDDW AYEIKFDGYR VLARIDASAK
310 320 330 340 350
GHGVQVFTRA GNDWTARFSR QVKAFGQLGL ESAWLDGEAV VLDENGVPSF
360 370 380 390 400
QALQNAFDSN RPQDIVVYLF DVPFLNGYDL RGVPLQQRRA ILRALLEPVD
410 420 430 440 450
DSVLRFSNDF EFSADDLLKS ACDMALEGII GKRRDSGYVS GRSATWIKLK
460 470 480 490 500
CRRRQEFVIG GYSEPSGSRA AFGALLLGVH DSKGKLQYAG RVGTGFDAAL
510 520 530 540 550
LRSVKKELDA HETKRMPFAS PPRERSRTPV HWVEPVLVAE CNFAEWTSDG
560 570 580 590 600
IVRQASFVSL RKDKPARQIV KEAPRKGDDV QQQTDIEADT APKKRAARSK
610 620 630 640 650
GTGKTAAATA DELAEGTAEK NARKPVEPAA KSAAKPAAKA AAKSGASAKR
660 670 680 690 700
TATSDTDNDT ENDTHAQSPA SRSRKSASPA EVAGVRISHP DRVIDKSTGA
710 720 730 740 750
RKIDLVQYYE SVARWMLPHL ADRPVSLVRA PEDIGGELFF QKHTQKLSIP
760 770 780 790 800
NITQHPGLDP GHPPLITVDS VKALVGAAQM GTIEFHTWNG VASNIEKPDR
810 820 830 840 850
VVFDLDPDPS LGWERMIEAA LLTRTLLEEL GLTSFCKTSG GKGLHVVVPL
860 870 880 890 900
AKHAGWDEVK GFSQAVAQHM ASTLPKYFSA KMGAQNRKQK IFVDYLRNNR
910 920 930 940 950
GSSTVAAFSV RARPGLGVSV PLAWDEVAQT TGGDQWNIRN LHERLAQLKS
960 970
DPWAEYPKTR QRITAAMRKR LSGA
Length:974
Mass (Da):106,386
Last modified:November 30, 2010 - v1
Checksum:i93EF22410554A6FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002217 Genomic DNA. Translation: ADN57539.1.
RefSeqiWP_013339149.1. NC_014539.1.
YP_003906830.1. NC_014539.1.

Genome annotation databases

EnsemblBacteriaiADN57539; ADN57539; BC1003_1569.
GeneIDi9766451.
KEGGibgf:BC1003_1569.
PATRICi42209341. VBIBurSp98639_1676.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002217 Genomic DNA. Translation: ADN57539.1 .
RefSeqi WP_013339149.1. NC_014539.1.
YP_003906830.1. NC_014539.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADN57539 ; ADN57539 ; BC1003_1569 .
GeneIDi 9766451.
KEGGi bgf:BC1003_1569.
PATRICi 42209341. VBIBurSp98639_1676.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi SACDMAL.

Enzyme and pathway databases

BioCyci BSP640512:GBXV-1591-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCGE1003Imported.

Entry informationi

Entry nameiE1T7A9_BURSG
AccessioniPrimary (citable) accession number: E1T7A9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: October 1, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3