E1T2N5 (E1T2N5_THESX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LacI family EMBL ADN53861.1

Gene names

Ordered Locus Names:

Thet_0198

Organism

Thermoanaerobacter sp. (strain X513) [Complete proteome] [HAMAP] EMBL ADN53861.1

Taxonomic identifier

573062 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Thermoanaerobacterales › Thermoanaerobacteraceae › Thermoanaerobacter

Protein attributes

Sequence length	336 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH lacI-type DNA-binding domain. SAAS SAAS000843

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000708 SAAS SAAS000843
Ligand	DNA-binding RuleBase RU000708 SAAS SAAS000843
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E1T2N5 [UniParc]. Last modified November 30, 2010. Version 1. Checksum: 57E36A2C0F17867B	FASTA	336	37,542
	10 20 30 40 50 60 MAVTIKDIAK LANVSITTVS RVINNKSEGV SEETRNRILQ LVKELGYQPN AIARGLVTKK 70 80 90 100 110 120 TKTIGLIIPD ISNPFFPDIA RGVEDSAHIY GYNVFLCNTD DNLEKESEYI NALKEKYVDG 130 140 150 160 170 180 IIFTSSSIPK HEHIMELVKS GIPIVIMDRR VDSEDIYGVF LDNYEGGYIA TKHLIDLGHK 190 200 210 220 230 240 KIACITGPLY TKSAKERLEG YKKALVENGM DVDERLIFEG DYKINSGIIG TEKLLGNNEN 250 260 270 280 290 300 VTAIFACNDL MAYGAYKTIR SYGYKIPDDI SIVGFDDIQL SQILEPQLTT IKQPAYDMGL 310 320 330 AAARMLIKLV EGKKLKKKII NFRPQLIIRQ STKNIG

References

[1]

"Complete sequence of Thermoanaerobacter sp. X513." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Daligault H., Davenport K., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Hemme C.L., Woyke T. Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: X513.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002210 Genomic DNA. Translation: ADN53861.1.
RefSeq	YP_003903152.1. NC_014538.1.
3D structure databases
ProteinModelPortal	E1T2N5.
SMR	E1T2N5. Positions 4-56.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADN53861; ADN53861; Thet_0198.
GeneID	9759943.
KEGG	thx:Thet_0198.
PATRIC	42444430. VBITheSp37765_0209.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000220180.
KO	K02529.
OMA	AYDMGLT.
Family and domain databases
Gene3D	1.10.260.40. 1 hit.
InterPro	IPR010982. Lambda_DNA-bd_dom. IPR001761. Peripla_BP/Lac1_sug-bd_dom. IPR000843. Tscrpt_reg_HTH_LacI. [Graphical view]
Pfam	PF00356. LacI. 1 hit. PF00532. Peripla_BP_1. 1 hit. [Graphical view]
PRINTS	PR00036. HTHLACI.
SMART	SM00354. HTH_LACI. 1 hit. [Graphical view]
SUPFAM	SSF47413. Lambda_like_DNA. 1 hit.
PROSITE	PS00356. HTH_LACI_1. 1 hit. PS50932. HTH_LACI_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E1T2N5_THESX

Accession

Primary (citable) accession number: E1T2N5

Entry history

Integrated into UniProtKB/TrEMBL:	November 30, 2010
Last sequence update:	November 30, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)