E1STT2 (E1STT2_FERBD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003887
EC=5.4.99.- RuleBase RU003887

Gene names

Ordered Locus Names:

Fbal_1992

Organism

Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) [Complete proteome] [HAMAP] EMBL ADN76195.1

Taxonomic identifier

550540 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Ferrimonadaceae › Ferrimonas › Ferrimonas balearica

Protein attributes

Sequence length	214 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rsuA family. RuleBase RU003887

Ontologies

Keywords
Molecular function	Isomerase RuleBase RU003887 SAAS SAAS000748 EMBL ADN76195.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E1STT2 [UniParc]. Last modified November 30, 2010. Version 1. Checksum: 4961FF5B0BE5796C	FASTA	214	24,287
	10 20 30 40 50 60 MHQRNSKTAG QARSSNARRR KPLRRPDRPR EARRIVLFNK PFDVLSQFTD GGNRATLADY 70 80 90 100 110 120 IQEPGVYAAG RLDRDSEGLL LLTNDGALQA KLTQPGKKTS KTYYVQVEGE PDEAALQALR 130 140 150 160 170 180 DGVTLNDGPT LPAKVERIDE PHWLWPRNPP IRERKAIPTS WLSISIIEGR NRQVRRMTAH 190 200 210 IGYPTLRLIR YRIGSWTLDG LANGEYRVLH GNES

References

[1]

"Complete genome sequence of Ferrimonas balearica type strain (PAT)." Nolan M., Sikorski J., Davenport K., Lucas S., Glavina Del Rio T., Tice H., Cheng J., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Ovchinnikova G., Pati A., Chen A., Palaniappan K., Land M., Hauser L. , Chang Y., Jeffries C., Tapia R., Brettin T., Detter J., Han C., Yasawong M., Rohde M., Tindall B., Goker M., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H., Lapidus A. Stand. Genomic Sci. 3:174-182(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 9799 / CCM 4581 / PAT.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002209 Genomic DNA. Translation: ADN76195.1.
RefSeq	YP_003913269.1. NC_014541.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADN76195; ADN76195; Fbal_1992.
GeneID	9770773.
KEGG	fbl:Fbal_1992.
PATRIC	42325649. VBIFerBal3052_2013.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000044955.
KO	K06181.
OMA	TWIELSI.
Enzyme and pathway databases
BioCyc	FBAL550540:GHY2-2057-MONOMER.
Family and domain databases
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR000748. PsdUridine_synth_RsuA/RluB/E/F. IPR018496. PsdUridine_synth_RsuA/RluB_CS. IPR006145. PsdUridine_synth_RsuA/RluD. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00093. TIGR00093. 1 hit.
PROSITE	PS01149. PSI_RSU. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E1STT2_FERBD

Accession

Primary (citable) accession number: E1STT2

Entry history

Integrated into UniProtKB/TrEMBL:	November 30, 2010
Last sequence update:	November 30, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)