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E1SR02 (E1SR02_FERBD) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA polymerase I EMBL ADN77932.1
EC=2.7.7.7 EMBL ADN77932.1
Gene names
Ordered Locus Names:Fbal_3739
OrganismFerrimonas balearica (strain DSM 9799 / CCM 4581 / PAT) [Complete proteome] [HAMAP] EMBL ADN77932.1
Taxonomic identifier550540 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Ferrimonadaceae › Ferrimonas ›

Protein attributes

Sequence length922 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the DNA polymerase type-A family. RuleBase RU004459

Contains 1 5'-3' exonuclease domain. SAAS SAAS002421

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1212 Potential EMBL ADN77932.1
Chain13 – 922910 Potential EMBL ADN77932.1
PRO_5000640150

Sequences

Sequence LengthMass (Da)Tools
E1SR02 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: 2F840F309663B98F

FASTA922101,531
        10         20         30         40         50         60 
MKLASMSHSA QAPLILVDGS SYLYRAYHAP PHLTNSRGEP TGAVYGVVNM LRSLLKQYGP 

        70         80         90        100        110        120 
SHMAVVFDAK GKTFRDEIYA EYKAHRPPMP DDLRCQIEPL HAIIRALGLP LICISGVEAD 

       130        140        150        160        170        180 
DVIGTLAQQA EAEGHDVLIS TGDKDMAQLV TDKITLINTM TDTVMDVEGV HNKFGVGPEL 

       190        200        210        220        230        240 
IIDLLAMMGD KVDNIPGLPG VGEKTALAML QGIGSLEAIY QDVDAVAALG FRGAKTMPKK 

       250        260        270        280        290        300 
LAEHKEAAFL SYTLATIKTD VELDQKPSEL LIGEADRDAL AKLYGDLEFR RWLNEVLDGG 

       310        320        330        340        350        360 
AILPAGNGDN GASAKAPAQN GTEHELILTE SQLDTWIEKL SQAELFAIDT ETTSIDYMAA 

       370        380        390        400        410        420 
ELVGLSFAVE AGKGAYLPVA HDYEGAPVQL DRDTVLAKLK PLLEDTAPRK VGQNLKYDMS 

       430        440        450        460        470        480 
VLAKYGIALN GIAFDTMLES YCFNSTAGRH NMDDMALKYL GHKTIHFEDI AGKGAKQKTF 

       490        500        510        520        530        540 
NQIPLEEAAP YAAEDADITL RLHQHLWPRL QELAGPTRVF EQLERPLVPI MSAMERHGVL 

       550        560        570        580        590        600 
IDTDQLHQQS SEIATTLDSL EQQAHEIAGE VFNLGSTKQL QAIFFDKLGY PVLKKTPKGA 

       610        620        630        640        650        660 
PSTAEEVLQE LALDYPLPKI ILEHRSLAKL KNTYTDKLPQ LVKPSGRVHT SYHQAVTATG 

       670        680        690        700        710        720 
RLSSSDPNLQ NIPIRTAEGR RIRQAFIAPE GYKLLAIDYS QIELRIMAHL SQDKGLLEAF 

       730        740        750        760        770        780 
AAGKDIHKAT AAEVFGVDFD SVTTEQRRRA KAVNFGLIYG MSAFGLAKQL DIGRAEAQEY 

       790        800        810        820        830        840 
IDRYFHRYPG VLEYMDRTRA QAHDKEYVET LMGRRLHLPE INARNKMRQQ AAERTAINAP 

       850        860        870        880        890        900 
MQGTAADIIK KAMLLVADYL SQQAEDEIHL IMQVHDELVF EVREGVAEQH KDALCELMSQ 

       910        920 
AAELDVPLLA EGGLGDNWDQ AH

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002209 Genomic DNA. Translation: ADN77932.1.
RefSeqYP_003915006.1. NC_014541.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN77932; ADN77932; Fbal_3739.
GeneID9772594.
KEGGfbl:Fbal_3739.
PATRIC42329292. VBIFerBal3052_3764.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000020999.
KOK02335.
OMAEQRRYAK.

Enzyme and pathway databases

BioCycFBAL550540:GHY2-3879-MONOMER.

Family and domain databases

InterProIPR002562. 3'-5'_exonuclease_dom.
IPR020046. 5-3_exonucl_a-hlix_arch_N.
IPR020045. 5-3_exonuclease_C.
IPR002421. 5-3_exonuclease_N.
IPR019760. DNA-dir_DNA_pol_A_CS.
IPR001098. DNA-dir_DNA_pol_A_palm_dom.
IPR018320. DNA_polymerase_1.
IPR002298. DNA_polymerase_A.
IPR008918. HhH2.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamPF01367. 5_3_exonuc. 1 hit.
PF02739. 5_3_exonuc_N. 1 hit.
PF00476. DNA_pol_A. 1 hit.
PF01612. DNA_pol_A_exo1. 1 hit.
[Graphical view]
PRINTSPR00868. DNAPOLI.
SMARTSM00474. 35EXOc. 1 hit.
SM00475. 53EXOc. 1 hit.
SM00279. HhH2. 1 hit.
SM00482. POLAc. 1 hit.
[Graphical view]
SUPFAMSSF47807. 5_3_exo_C. 1 hit.
SSF53098. RNaseH_fold. 1 hit.
TIGRFAMsTIGR00593. pola. 1 hit.
PROSITEPS00447. DNA_POLYMERASE_A. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE1SR02_FERBD
AccessionPrimary (citable) accession number: E1SR02
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: May 29, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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