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Protein

Outer membrane protein assembly factor BamC

Gene

bamC

Organism
Ferrimonas balearica (strain DSM 9799 / CCM 4581 / PAT)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.UniRule annotation

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciFBAL550540:GHY2-1335-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Outer membrane protein assembly factor BamCUniRule annotation
Gene namesi
Name:bamCUniRule annotation
Ordered Locus Names:Fbal_1290
OrganismiFerrimonas balearica (strain DSM 9799 / CCM 4581 / PAT)
Taxonomic identifieri550540 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesFerrimonadaceaeFerrimonas
Proteomesi
  • UP000006683 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation; Lipid-anchor UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell outer membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919UniRule annotationAdd
BLAST
Chaini20 – 365346Outer membrane protein assembly factor BamCPRO_5000639712Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi20 – 201N-palmitoyl cysteineUniRule annotation
Lipidationi20 – 201S-diacylglycerol cysteineUniRule annotation

Keywords - PTMi

Lipoprotein, Palmitate

Interactioni

Subunit structurei

Part of the Bam complex.UniRule annotation

Protein-protein interaction databases

STRINGi550540.Fbal_1290.

Family & Domainsi

Sequence similaritiesi

Belongs to the BamC family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4107EG0. Bacteria.
COG3317. LUCA.
HOGENOMiHOG000290521.
KOiK07287.
OMAiQKSMVAK.

Family and domain databases

HAMAPiMF_00924. OM_assembly_BamC.
InterProiIPR014524. BamC.
IPR010653. NlpB/DapX.
[Graphical view]
PfamiPF06804. Lipoprotein_18. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E1SLW4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKHNRLAIAA LAPVLILVGC STPLERRQAS GGFDYLEQPA PTPLVVPAGL
60 70 80 90 100
DAPRLSREFD IPKLGDNAER DVVGPRLDVR PPLQVLPLAP GTRIQDGVDS
110 120 130 140 150
ITVLVESNQD DIDLAQEIHD TLLKFLDDKS INVARDDSGV IVTDWIENEE
160 170 180 190 200
VIGKSWFRDK VYQIRQRYEF DTVVKDHGRS GSITIELVDH EEGLDGVDDS
210 220 230 240 250
IVLTDADRRR YAIDMLNNAI AYMNFERQQR QATQELLNGR GIKTELGFDS
260 270 280 290 300
DENTAFVAEA SFDQVWRRMD KVLPLLGFQV RDLDQQLATY FVDYEPDGGF
310 320 330 340 350
WASLWGDNDE LPLEEGPYQI RLEPMGERTA ITLMDNEANP LPTETVTQMY
360
NRFAELLQKE SRDLQ
Length:365
Mass (Da):41,287
Last modified:November 30, 2010 - v1
Checksum:iA224891EED8C5F8B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002209 Genomic DNA. Translation: ADN75496.1.
RefSeqiWP_013344802.1. NC_014541.1.

Genome annotation databases

EnsemblBacteriaiADN75496; ADN75496; Fbal_1290.
KEGGifbl:Fbal_1290.
PATRICi42324187. VBIFerBal3052_1302.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002209 Genomic DNA. Translation: ADN75496.1.
RefSeqiWP_013344802.1. NC_014541.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi550540.Fbal_1290.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADN75496; ADN75496; Fbal_1290.
KEGGifbl:Fbal_1290.
PATRICi42324187. VBIFerBal3052_1302.

Phylogenomic databases

eggNOGiENOG4107EG0. Bacteria.
COG3317. LUCA.
HOGENOMiHOG000290521.
KOiK07287.
OMAiQKSMVAK.

Enzyme and pathway databases

BioCyciFBAL550540:GHY2-1335-MONOMER.

Family and domain databases

HAMAPiMF_00924. OM_assembly_BamC.
InterProiIPR014524. BamC.
IPR010653. NlpB/DapX.
[Graphical view]
PfamiPF06804. Lipoprotein_18. 1 hit.
[Graphical view]
PROSITEiPS51257. PROKAR_LIPOPROTEIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 9799 / CCM 4581 / PAT.

Entry informationi

Entry nameiBAMC_FERBD
AccessioniPrimary (citable) accession number: E1SLW4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 13, 2012
Last sequence update: November 30, 2010
Last modified: November 11, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.