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Protein

Superoxide dismutase

Gene

sodA

Organism
Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi81Divalent metal cationUniRule annotation1
Metal bindingi167Divalent metal cationUniRule annotation1
Metal bindingi171Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:Pvag_3332Imported
OrganismiPantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))Imported
Taxonomic identifieri712898 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesErwiniaceaePantoea
Proteomesi
  • UP000006631 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi712898.Pvag_3332.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 88Sod_Fe_NInterPro annotationAdd BLAST87
Domaini95 – 200Sod_Fe_CInterPro annotationAdd BLAST106

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013583.
KOiK04564.
OMAiDSPLMHG.
OrthoDBiPOG091H03Q7.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR036324. Mn/Fe_SOD_N_sf.
IPR036314. SOD_C_sf.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.

Sequencei

Sequence statusi: Complete.

E1SK21-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSYSLPSLPY AYDALEPHFD KQTMEIHHTK HHQTYVNNAN AALEGTEFAN
60 70 80 90 100
LPVDELITKL DQLPADKKGP LRNNAGGHAN HSLFWKGLKT GTTLQGDLKA
110 120 130 140 150
AIEKDFGSVE KFQEEFEKAA ATRFGSGWAW LVKKGDKLAV VSTANQDNPL
160 170 180 190 200
MGEAVAGVSG FPIIGLDVWE HAYYLKYQNK RPDYIKAFWN VVNWDEAAAR

FASAK
Length:205
Mass (Da):22,840
Last modified:November 30, 2010 - v1
Checksum:iC05E5513438F4260
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002206 Genomic DNA. Translation: ADO11470.1.
RefSeqiWP_013359624.1. NC_014562.1.

Genome annotation databases

EnsemblBacteriaiADO11470; ADO11470; Pvag_3332.
KEGGipva:Pvag_3332.

Similar proteinsi

Entry informationi

Entry nameiE1SK21_PANVC
AccessioniPrimary (citable) accession number: E1SK21
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: October 25, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported