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E1SK21

- E1SK21_PANVC

UniProt

E1SK21 - E1SK21_PANVC

Protein

Superoxide dismutase

Gene

sodA

Organism
Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
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    Functioni

    Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation
    Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: InterPro
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciPVAG712898:GHQ2-3324-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
    Gene namesi
    Name:sodAImported
    Ordered Locus Names:Pvag_3332Imported
    OrganismiPantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))Imported
    Taxonomic identifieri712898 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
    ProteomesiUP000006631: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000013583.
    KOiK04564.
    OMAiPLPYDYN.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E1SK21-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSYSLPSLPY AYDALEPHFD KQTMEIHHTK HHQTYVNNAN AALEGTEFAN    50
    LPVDELITKL DQLPADKKGP LRNNAGGHAN HSLFWKGLKT GTTLQGDLKA 100
    AIEKDFGSVE KFQEEFEKAA ATRFGSGWAW LVKKGDKLAV VSTANQDNPL 150
    MGEAVAGVSG FPIIGLDVWE HAYYLKYQNK RPDYIKAFWN VVNWDEAAAR 200
    FASAK 205
    Length:205
    Mass (Da):22,840
    Last modified:November 30, 2010 - v1
    Checksum:iC05E5513438F4260
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002206 Genomic DNA. Translation: ADO11470.1.
    RefSeqiWP_013359624.1. NC_014562.1.
    YP_003932919.1. NC_014562.1.

    Genome annotation databases

    EnsemblBacteriaiADO11470; ADO11470; Pvag_3332.
    GeneIDi9791844.
    KEGGipva:Pvag_3332.
    PATRICi42422843. VBIPanVag152020_3492.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002206 Genomic DNA. Translation: ADO11470.1 .
    RefSeqi WP_013359624.1. NC_014562.1.
    YP_003932919.1. NC_014562.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO11470 ; ADO11470 ; Pvag_3332 .
    GeneIDi 9791844.
    KEGGi pva:Pvag_3332.
    PATRICi 42422843. VBIPanVag152020_3492.

    Phylogenomic databases

    HOGENOMi HOG000013583.
    KOi K04564.
    OMAi PLPYDYN.

    Enzyme and pathway databases

    BioCyci PVAG712898:GHQ2-3324-MONOMER.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of the biocontrol agent Pantoea vagans strain C9-1."
      Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A., Stockwell V.O., Frey J.E., Duffy B.
      J. Bacteriol. 192:6486-6487(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C9-1Imported.

    Entry informationi

    Entry nameiE1SK21_PANVC
    AccessioniPrimary (citable) accession number: E1SK21
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3