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E1SHQ8 (E1SHQ8_PANVC) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.3.1.3 EMBL ADO08857.1
Gene names
Name:huth3 EMBL ADO08857.1
Ordered Locus Names:Pvag_0655 EMBL ADO08857.1
OrganismPantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)) [Complete proteome] [HAMAP] EMBL ADO08857.1
Taxonomic identifier712898 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea

Protein attributes

Sequence length505 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ADO08857.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhistidine ammonia-lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E1SHQ8 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: DA0A527146C3DEBC

FASTA50554,126
        10         20         30         40         50         60 
MSGVTKQRRV WGDGPLKWQE LVQVARHGAT LTLSDSAWQR IAQSREIVGN IVAAGQVAYG 

        70         80         90        100        110        120 
INTGLGALCN ITLSEDELGQ LSRNTLMSHA CGVGPVLKKA EVRAILCAAI ANYSHGKSGV 

       130        140        150        160        170        180 
SVALVQQLLA LLNLQITPQV PSQGSVGYLT HMAHIGLALI GIGEVEWRGE IIPAQQALEQ 

       190        200        210        220        230        240 
AGLAPYRPGA KEGLSLVNGT PCMTGLACLA LDDAERLLDW ADVTGAMSFE ALRGQLVAFD 

       250        260        270        280        290        300 
PEVLALKASP GIQRSGERLR QLLRDSPLLN ASVGIRTQDA LSLRSMPQVH GACRDQFDHA 

       310        320        330        340        350        360 
ARQVETELNA CTDNPLILGT PQAWRVVSQS HPHGESVAMA CDLLAIALAE LGSIAERRLD 

       370        380        390        400        410        420 
RLVNPLVSGL PPFLVAEPGV NSGMMIAQYV AASLCAENRQ LAQPAVLDNY VTSGLQEDHL 

       430        440        450        460        470        480 
SLGTGSALKL LKLVSNVDHI IAIEYLLAAQ ALEFHGESEL AAGTRRAWQL LRQVVDRWQQ 

       490        500 
DRWLAPDIAR AVAQIKAHRA DALME 

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References

[1]"Genome sequence of the biocontrol agent Pantoea vagans strain C9-1."
Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A., Stockwell V.O., Frey J.E., Duffy B.
J. Bacteriol. 192:6486-6487(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C9-1 EMBL ADO08857.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002206 Genomic DNA. Translation: ADO08857.1.
RefSeqYP_003930306.1. NC_014562.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO08857; ADO08857; Pvag_0655.
GeneID9789175.
KEGGpva:Pvag_0655.
PATRIC42417361. VBIPanVag152020_0802.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000237620.
KOK01745.

Enzyme and pathway databases

BioCycPVAG712898:GHQ2-884-MONOMER.

Family and domain databases

Gene3D1.10.275.10. 1 hit.
InterProIPR001106. Aromatic_Lyase.
IPR024083. Fumarase/histidase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PfamPF00221. Lyase_aromatic. 1 hit.
[Graphical view]
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1SHQ8_PANVC
AccessionPrimary (citable) accession number: E1SHQ8
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)