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E1SH12

- E1SH12_PANVC

UniProt

E1SH12 - E1SH12_PANVC

Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
    2. thiamine pyrophosphate binding Source: InterPro

    GO - Biological processi

    1. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciPVAG712898:GHQ2-548-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
    Gene namesi
    Name:sucAImported
    Ordered Locus Names:Pvag_0548Imported
    OrganismiPantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))Imported
    Taxonomic identifieri712898 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
    ProteomesiUP000006631: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000259588.
    KOiK00164.
    OMAiGHQNANL.

    Family and domain databases

    Gene3Di3.40.50.970. 2 hits.
    InterProiIPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view]
    PANTHERiPTHR23152. PTHR23152. 1 hit.
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E1SH12-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQNSAMKPWL DSSWLAGANQ SYIEQLYEDF LTDPDSVDAV WRSMFQQLPG    50
    TGMKPEQFHS TTREYFRRLA KDASRYTSSV SDPETNSKQV KVLQLINAFR 100
    FRGHQHANLD PLGLWKQDRV ADLDPAFHDL TEADFQESFN VGSFAIGKET 150
    MKLADLFDAL TQTYCGSIGA EYMHINNTDE KRWIQQRLES VAGRAAFSNE 200
    EKKGFLKELT AAEGLEKYLG AKFPGAKRFS LEGGDALVPM LREMIRHAGK 250
    SGTREVVLGM AHRGRLNVLI NVLGKKPQDL FDEFAGKHKE HLGTGDVKYH 300
    MGFSSDVETE GGLVHLALAF NPSHLEIVSP VVMGSVRARL DRLDEPASNK 350
    VLPITIHGDA AVIGQGVVQE TLNMSQARGY EVGGTVRIVI NNQVGFTTSN 400
    PKDARSTPYC TDIGKMVLAP IFHVNADDPE AVAFVTRLAL DYRNTFKRDV 450
    FIDLVCYRRH GHNEADEPSA TQPLMYQKIK KHPTPRKIYA DRLEGEAVAT 500
    QEDATEMVNL YRDALDAGEC VVPEWRPMSL HSFTWSPYLN HEWDEPYPAQ 550
    VDMKRLKELA LRISQVPEEV EVQSRVAKIY NDRRLMAEGE KAFDWGGAEN 600
    LAYATLVDEG IPVRLSGEDT GRGTFFHRHA VVHNQANGST YTPLHHVHSG 650
    QGQFKVWDSV LSEEAVLAFE YGYATAEPRI LTIWEAQFGD FANGAQVVID 700
    QFISSGEQKW GRMCGLVMLL PHGYEGQGPE HSSARLERYL QLCAEQNMQV 750
    CVPSTPAQVY HMLRRQALRG MRRPLIVMSP KSLLRHPLAI STLDELANGS 800
    FQPAIGEVDN LDAQGVKRVV LCSGKVYYDL LEQRRKNEQT DVAIVRIEQL 850
    YPFPHHAVQE ALQAYSHVQD FVWCQEEPLN QGAWYCSQHH FREVVPFGAT 900
    LRYAGRPASA SPAVGYMSVH QQQQQDLVND ALNVN 935
    Length:935
    Mass (Da):105,061
    Last modified:November 30, 2010 - v1
    Checksum:iA5F20F4CE5CEB8D6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002206 Genomic DNA. Translation: ADO08753.1.
    RefSeqiWP_013357145.1. NC_014562.1.
    YP_003930202.1. NC_014562.1.

    Genome annotation databases

    EnsemblBacteriaiADO08753; ADO08753; Pvag_0548.
    GeneIDi9789068.
    KEGGipva:Pvag_0548.
    PATRICi42417149. VBIPanVag152020_0698.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002206 Genomic DNA. Translation: ADO08753.1 .
    RefSeqi WP_013357145.1. NC_014562.1.
    YP_003930202.1. NC_014562.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO08753 ; ADO08753 ; Pvag_0548 .
    GeneIDi 9789068.
    KEGGi pva:Pvag_0548.
    PATRICi 42417149. VBIPanVag152020_0698.

    Phylogenomic databases

    HOGENOMi HOG000259588.
    KOi K00164.
    OMAi GHQNANL.

    Enzyme and pathway databases

    BioCyci PVAG712898:GHQ2-548-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.970. 2 hits.
    InterProi IPR011603. 2oxoglutarate_DH_E1.
    IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR005475. Transketolase-like_Pyr-bd.
    [Graphical view ]
    PANTHERi PTHR23152. PTHR23152. 1 hit.
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence of the biocontrol agent Pantoea vagans strain C9-1."
      Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A., Stockwell V.O., Frey J.E., Duffy B.
      J. Bacteriol. 192:6486-6487(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C9-1Imported.

    Entry informationi

    Entry nameiE1SH12_PANVC
    AccessioniPrimary (citable) accession number: E1SH12
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3