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E1SH12

- E1SH12_PANVC

UniProt

E1SH12 - E1SH12_PANVC

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Protein
Submitted name: 2-oxoglutarate dehydrogenase E1 component
Gene
sucA, Pvag_0548
Organism
Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciPVAG712898:GHQ2-548-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:Pvag_0548Imported
OrganismiPantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))Imported
Taxonomic identifieri712898 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
ProteomesiUP000006631: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259588.
KOiK00164.
OMAiGHQNANL.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

E1SH12-1 [UniParc]FASTAAdd to Basket

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MQNSAMKPWL DSSWLAGANQ SYIEQLYEDF LTDPDSVDAV WRSMFQQLPG    50
TGMKPEQFHS TTREYFRRLA KDASRYTSSV SDPETNSKQV KVLQLINAFR 100
FRGHQHANLD PLGLWKQDRV ADLDPAFHDL TEADFQESFN VGSFAIGKET 150
MKLADLFDAL TQTYCGSIGA EYMHINNTDE KRWIQQRLES VAGRAAFSNE 200
EKKGFLKELT AAEGLEKYLG AKFPGAKRFS LEGGDALVPM LREMIRHAGK 250
SGTREVVLGM AHRGRLNVLI NVLGKKPQDL FDEFAGKHKE HLGTGDVKYH 300
MGFSSDVETE GGLVHLALAF NPSHLEIVSP VVMGSVRARL DRLDEPASNK 350
VLPITIHGDA AVIGQGVVQE TLNMSQARGY EVGGTVRIVI NNQVGFTTSN 400
PKDARSTPYC TDIGKMVLAP IFHVNADDPE AVAFVTRLAL DYRNTFKRDV 450
FIDLVCYRRH GHNEADEPSA TQPLMYQKIK KHPTPRKIYA DRLEGEAVAT 500
QEDATEMVNL YRDALDAGEC VVPEWRPMSL HSFTWSPYLN HEWDEPYPAQ 550
VDMKRLKELA LRISQVPEEV EVQSRVAKIY NDRRLMAEGE KAFDWGGAEN 600
LAYATLVDEG IPVRLSGEDT GRGTFFHRHA VVHNQANGST YTPLHHVHSG 650
QGQFKVWDSV LSEEAVLAFE YGYATAEPRI LTIWEAQFGD FANGAQVVID 700
QFISSGEQKW GRMCGLVMLL PHGYEGQGPE HSSARLERYL QLCAEQNMQV 750
CVPSTPAQVY HMLRRQALRG MRRPLIVMSP KSLLRHPLAI STLDELANGS 800
FQPAIGEVDN LDAQGVKRVV LCSGKVYYDL LEQRRKNEQT DVAIVRIEQL 850
YPFPHHAVQE ALQAYSHVQD FVWCQEEPLN QGAWYCSQHH FREVVPFGAT 900
LRYAGRPASA SPAVGYMSVH QQQQQDLVND ALNVN 935
Length:935
Mass (Da):105,061
Last modified:November 30, 2010 - v1
Checksum:iA5F20F4CE5CEB8D6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002206 Genomic DNA. Translation: ADO08753.1.
RefSeqiWP_013357145.1. NC_014562.1.
YP_003930202.1. NC_014562.1.

Genome annotation databases

EnsemblBacteriaiADO08753; ADO08753; Pvag_0548.
GeneIDi9789068.
KEGGipva:Pvag_0548.
PATRICi42417149. VBIPanVag152020_0698.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002206 Genomic DNA. Translation: ADO08753.1 .
RefSeqi WP_013357145.1. NC_014562.1.
YP_003930202.1. NC_014562.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO08753 ; ADO08753 ; Pvag_0548 .
GeneIDi 9789068.
KEGGi pva:Pvag_0548.
PATRICi 42417149. VBIPanVag152020_0698.

Phylogenomic databases

HOGENOMi HOG000259588.
KOi K00164.
OMAi GHQNANL.

Enzyme and pathway databases

BioCyci PVAG712898:GHQ2-548-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of the biocontrol agent Pantoea vagans strain C9-1."
    Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A., Stockwell V.O., Frey J.E., Duffy B.
    J. Bacteriol. 192:6486-6487(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C9-1Imported.

Entry informationi

Entry nameiE1SH12_PANVC
AccessioniPrimary (citable) accession number: E1SH12
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: September 3, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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