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E1SH12

- E1SH12_PANVC

UniProt

E1SH12 - E1SH12_PANVC

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Protein
Submitted name:

2-oxoglutarate dehydrogenase E1 component

Gene

sucA

Organism
Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciPVAG712898:GHQ2-548-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase E1 componentImported (EC:1.2.4.2Imported)
Gene namesi
Name:sucAImported
Ordered Locus Names:Pvag_0548Imported
OrganismiPantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))Imported
Taxonomic identifieri712898 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
ProteomesiUP000006631: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259588.
KOiK00164.
OMAiGHQNANL.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

E1SH12-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQNSAMKPWL DSSWLAGANQ SYIEQLYEDF LTDPDSVDAV WRSMFQQLPG
60 70 80 90 100
TGMKPEQFHS TTREYFRRLA KDASRYTSSV SDPETNSKQV KVLQLINAFR
110 120 130 140 150
FRGHQHANLD PLGLWKQDRV ADLDPAFHDL TEADFQESFN VGSFAIGKET
160 170 180 190 200
MKLADLFDAL TQTYCGSIGA EYMHINNTDE KRWIQQRLES VAGRAAFSNE
210 220 230 240 250
EKKGFLKELT AAEGLEKYLG AKFPGAKRFS LEGGDALVPM LREMIRHAGK
260 270 280 290 300
SGTREVVLGM AHRGRLNVLI NVLGKKPQDL FDEFAGKHKE HLGTGDVKYH
310 320 330 340 350
MGFSSDVETE GGLVHLALAF NPSHLEIVSP VVMGSVRARL DRLDEPASNK
360 370 380 390 400
VLPITIHGDA AVIGQGVVQE TLNMSQARGY EVGGTVRIVI NNQVGFTTSN
410 420 430 440 450
PKDARSTPYC TDIGKMVLAP IFHVNADDPE AVAFVTRLAL DYRNTFKRDV
460 470 480 490 500
FIDLVCYRRH GHNEADEPSA TQPLMYQKIK KHPTPRKIYA DRLEGEAVAT
510 520 530 540 550
QEDATEMVNL YRDALDAGEC VVPEWRPMSL HSFTWSPYLN HEWDEPYPAQ
560 570 580 590 600
VDMKRLKELA LRISQVPEEV EVQSRVAKIY NDRRLMAEGE KAFDWGGAEN
610 620 630 640 650
LAYATLVDEG IPVRLSGEDT GRGTFFHRHA VVHNQANGST YTPLHHVHSG
660 670 680 690 700
QGQFKVWDSV LSEEAVLAFE YGYATAEPRI LTIWEAQFGD FANGAQVVID
710 720 730 740 750
QFISSGEQKW GRMCGLVMLL PHGYEGQGPE HSSARLERYL QLCAEQNMQV
760 770 780 790 800
CVPSTPAQVY HMLRRQALRG MRRPLIVMSP KSLLRHPLAI STLDELANGS
810 820 830 840 850
FQPAIGEVDN LDAQGVKRVV LCSGKVYYDL LEQRRKNEQT DVAIVRIEQL
860 870 880 890 900
YPFPHHAVQE ALQAYSHVQD FVWCQEEPLN QGAWYCSQHH FREVVPFGAT
910 920 930
LRYAGRPASA SPAVGYMSVH QQQQQDLVND ALNVN
Length:935
Mass (Da):105,061
Last modified:November 30, 2010 - v1
Checksum:iA5F20F4CE5CEB8D6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002206 Genomic DNA. Translation: ADO08753.1.
RefSeqiYP_003930202.1. NC_014562.1.

Genome annotation databases

EnsemblBacteriaiADO08753; ADO08753; Pvag_0548.
GeneIDi9789068.
KEGGipva:Pvag_0548.
PATRICi42417149. VBIPanVag152020_0698.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002206 Genomic DNA. Translation: ADO08753.1 .
RefSeqi YP_003930202.1. NC_014562.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO08753 ; ADO08753 ; Pvag_0548 .
GeneIDi 9789068.
KEGGi pva:Pvag_0548.
PATRICi 42417149. VBIPanVag152020_0698.

Phylogenomic databases

HOGENOMi HOG000259588.
KOi K00164.
OMAi GHQNANL.

Enzyme and pathway databases

BioCyci PVAG712898:GHQ2-548-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The genome sequence of the biocontrol agent Pantoea vagans strain C9-1."
    Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A., Stockwell V.O., Frey J.E., Duffy B.
    J. Bacteriol. 192:6486-6487(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C9-1Imported.

Entry informationi

Entry nameiE1SH12_PANVC
AccessioniPrimary (citable) accession number: E1SH12
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: October 29, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3