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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyA

Organism
Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciPVAG712898:GHQ2-1759-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:amyAImported
Ordered Locus Names:Pvag_1764Imported
OrganismiPantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1))Imported
Taxonomic identifieri712898 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea
ProteomesiUP000006631: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE1SGR1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiNDGNHWN.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E1SGR1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLLDVVLNHK MGADEKEAIS VNRVNPDNRD EIYDEVVPCE AWTKFTFPAR
60 70 80 90 100
AGEYSKFVWD HKCFSGVDHI ENPDENGVFK IINDYTAEGW NDQVDNELGN
110 120 130 140 150
FDYLMGANID FRNNAVREEL KYWARWVMEQ VPCTGFRLDA VKHIPAWFYK
160 170 180 190 200
EWIDHIQEVA EEPMFIVAEY WSFETEKLQE YVHQVEGKTM LFDAPLHMNF
210 220 230 240 250
HQASTAGSAY DMSQIFANSL VVADPWHAVT IVANHDTQPL QSLEAPVEAW
260 270 280 290 300
FKPLAYALIL LREQGVPTIF YPDLFGATYE DEGGDGETHK IEMPVIPELE
310 320 330 340 350
GLIRARQQYG WGVQTDYFDH PNCVAFSRSG TETQPGCVVI MSNGDAGEKS
360 370 380 390
VPMGEGFAGK VWRDHLGNRE ETITANEHGT AVFVCNGGSV SVWVVAE
Length:397
Mass (Da):45,003
Last modified:November 30, 2010 - v1
Checksum:iEB620B1572BE8898
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002206 Genomic DNA. Translation: ADO09950.1.
RefSeqiWP_013358262.1. NC_014562.1.
YP_003931399.1. NC_014562.1.

Genome annotation databases

EnsemblBacteriaiADO09950; ADO09950; Pvag_1764.
GeneIDi9790279.
KEGGipva:Pvag_1764.
PATRICi42419621. VBIPanVag152020_1923.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002206 Genomic DNA. Translation: ADO09950.1.
RefSeqiWP_013358262.1. NC_014562.1.
YP_003931399.1. NC_014562.1.

3D structure databases

ProteinModelPortaliE1SGR1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO09950; ADO09950; Pvag_1764.
GeneIDi9790279.
KEGGipva:Pvag_1764.
PATRICi42419621. VBIPanVag152020_1923.

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiNDGNHWN.

Enzyme and pathway databases

BioCyciPVAG712898:GHQ2-1759-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of the biocontrol agent Pantoea vagans strain C9-1."
    Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A., Stockwell V.O., Frey J.E., Duffy B.
    J. Bacteriol. 192:6486-6487(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C9-1Imported.

Entry informationi

Entry nameiE1SGR1_PANVC
AccessioniPrimary (citable) accession number: E1SGR1
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: January 7, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.