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E1SCV3 (E1SCV3_PANVC) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
DNA mismatch repair protein MutH HAMAP-Rule MF_00759
Alternative name(s):
Methyl-directed mismatch repair protein HAMAP-Rule MF_00759
Gene names
Name:mutH HAMAP-Rule MF_00759 EMBL ADO10665.1
Ordered Locus Names:Pvag_2504 EMBL ADO10665.1
OrganismPantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)) [Complete proteome] [HAMAP] EMBL ADO10665.1
Taxonomic identifier712898 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePantoea

Protein attributes

Sequence length225 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair By similarity. HAMAP-Rule MF_00759 SAAS SAAS011337

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00759 SAAS SAAS011337.

Sequence similarities

Belongs to the MutH family. HAMAP-Rule MF_00759

Ontologies

Keywords
   Biological processDNA damage
DNA repair HAMAP-Rule MF_00759 SAAS SAAS011337
   Cellular componentCytoplasm HAMAP-Rule MF_00759 SAAS SAAS011337
   Molecular functionEndonuclease HAMAP-Rule MF_00759 SAAS SAAS011337
Hydrolase
Nuclease
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA modification

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

endonuclease activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E1SCV3 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: EB2D397C304FC6BC

FASTA22524,875
        10         20         30         40         50         60 
MRYPPGPPED EASLLARAQD LAGLPMETLA ARAGLPMPAD LKRDKGWVGM LLEWHLGASA 

        70         80         90        100        110        120 
GSKAEQDFAH LGIELKTIPI DAQGKPLETT FVCVAPLTGN SGVTWLTSHV RHKLARVLWI 

       130        140        150        160        170        180 
PVEGGREIPL RERRVGAPLL WSPDAEEDEM LRQDWEELMD MIVLGRVEQI TARHGAWLQI 

       190        200        210        220 
RPKAANSKAL TEGIGDQGQP IMTLPRGFYL KKSFTGPLLA RHFLL 

« Hide

References

[1]"The genome sequence of the biocontrol agent Pantoea vagans strain C9-1."
Smits T.H., Rezzonico F., Kamber T., Goesmann A., Ishimaru C.A., Stockwell V.O., Frey J.E., Duffy B.
J. Bacteriol. 192:6486-6487(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C9-1 EMBL ADO10665.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002206 Genomic DNA. Translation: ADO10665.1.
RefSeqYP_003932114.1. NC_014562.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO10665; ADO10665; Pvag_2504.
GeneID9791017.
KEGGpva:Pvag_2504.
PATRIC42421141. VBIPanVag152020_2663.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000271839.
KOK03573.
OMALRPKGAN.

Enzyme and pathway databases

BioCycPVAG712898:GHQ2-2497-MONOMER.

Family and domain databases

Gene3D3.40.600.10. 1 hit.
HAMAPMF_00759. MutH.
InterProIPR004230. DNA_mismatch_repair_MutH.
IPR011337. DNA_rep_MutH/RE_typeII.
IPR011335. Restrct_endonuc-II-like.
[Graphical view]
PfamPF02976. MutH. 1 hit.
[Graphical view]
SMARTSM00927. MutH. 1 hit.
[Graphical view]
SUPFAMSSF52980. SSF52980. 1 hit.
TIGRFAMsTIGR02248. mutH_TIGR. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1SCV3_PANVC
AccessionPrimary (citable) accession number: E1SCV3
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: April 16, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)