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E1S233 (E1S233_ECOUM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.6.1.19 EMBL ADN70072.1
Gene names
Ordered Locus Names:UM146_03280 EMBL ADN70072.1
OrganismEscherichia coli (strain UM146) [Complete proteome] [HAMAP] EMBL ADN70072.1
Taxonomic identifier869729 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length426 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
E1S233 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: C88AB721C131EEAF

FASTA42645,630
        10         20         30         40         50         60 
MSSNKELMQR RSQAIPRGVG QIHPIFADRA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP 

        70         80         90        100        110        120 
KVVAAVEAQL KKLSHTCFQV LAYEPYLELC EIMNQKVPGD FAKKTLLVTT GSEAVENAVK 

       130        140        150        160        170        180 
IARAATKRSG TIAFSGAYHG RTHYTLALTG KVNPYSAGMG LMPGHVYRAL YPCPLHGISE 

       190        200        210        220        230        240 
DDAIASIHRI FKNDAAPEDI AAIVIEPVQG EGGFYAATPA FMQRLRALCD EHGIMLIADE 

       250        260        270        280        290        300 
VQSGAGRTGT LFAMEQMGVA PDLTTFAKSI AGGFPLAGVT GRAEVMDAVA PGGLGGTYAG 

       310        320        330        340        350        360 
NPIACVAALE VLKVFEQENL LQKANDLGQK LKDGLLAIAE KHTEIGDVRG LGAMIAIELF 

       370        380        390        400        410        420 
EDGDHSKPDA KLTAEIVARA RDKGLILLSC GPYNNVLRIL VPLTIEDAQI RQGLEIISQC 


FAEAKQ 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of adherent invasive Escherichia coli UM146 isolated from ileal Crohn's disease biopsy tissue."
Krause D.O., Little A.C., Dowd S.E., Bernstein C.N.
J. Bacteriol. 193:583-583(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UM146 EMBL ADN70072.1.
[2]"Complete genome sequence of adherent invasive Escherichia coli UM146 isolated from ileal Crohn's disease biopsy tissue."
Krause D.O., Little A.C., Dowd S.E., Bernstein C.N.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: UM146.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002167 Genomic DNA. Translation: ADN70072.1.
RefSeqYP_006109584.1. NC_017632.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN70072; ADN70072; UM146_03280.
GeneID12699167.
KEGGelu:UM146_03280.
PATRIC42967685. VBIEscCol167775_0711.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000020206.
KOK07250.
OMALDRCKAV.

Enzyme and pathway databases

BioCycECOL869729:GI9Z-656-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE1S233_ECOUM
AccessionPrimary (citable) accession number: E1S233
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)