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E1RXW8 (E1RXW8_ECOUM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL ADN70900.1
Gene names
Ordered Locus Names:UM146_07545 EMBL ADN70900.1
OrganismEscherichia coli (strain UM146) [Complete proteome] [HAMAP] EMBL ADN70900.1
Taxonomic identifier869729 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length495 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ADN70900.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E1RXW8 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: 3D86F6FD3217DA34

FASTA49556,625
        10         20         30         40         50         60 
MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG GYSVGYDSYD 

        70         80         90        100        110        120 
LFDLGEFDQK GCIPTKYGDK AQLLAAIDAL KRNDIAVLLD VVVNHKMGAD EKEAIRVQRV 

       130        140        150        160        170        180 
NADDRTQIDE EIIECEGWTR YTFPARAGQY SQFIWDFKCF SGIDHIEHPD EDGIFKIVND 

       190        200        210        220        230        240 
YTGEGWNDQV DDELGNFDYL MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI 

       250        260        270        280        290        300 
PAWFYKEWIE HVQEVAPKPL FIVAEYWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS 

       310        320        330        340        350        360 
RMGRDYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL AYALILLREN 

       370        380        390        400        410        420 
GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL ARQRFAHGVQ TLFFDHPNCI 

       430        440        450        460        470        480 
AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG ENYGNKTWRD FLGNRQESVV TDENGEATFF 

       490 
CNGGSVSVWV IEEVI 

« Hide

References

« Hide 'large scale' references
[1]"Complete genome sequence of adherent invasive Escherichia coli UM146 isolated from ileal Crohn's disease biopsy tissue."
Krause D.O., Little A.C., Dowd S.E., Bernstein C.N.
J. Bacteriol. 193:583-583(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UM146 EMBL ADN70900.1.
[2]"Complete genome sequence of adherent invasive Escherichia coli UM146 isolated from ileal Crohn's disease biopsy tissue."
Krause D.O., Little A.C., Dowd S.E., Bernstein C.N.
Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: UM146.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002167 Genomic DNA. Translation: ADN70900.1.
RefSeqYP_006110412.1. NC_017632.1.

3D structure databases

ProteinModelPortalE1RXW8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN70900; ADN70900; UM146_07545.
GeneID12700013.
KEGGelu:UM146_07545.
PATRIC42969509. VBIEscCol167775_1597.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000094847.
KOK01176.
OMARATKYGD.

Enzyme and pathway databases

BioCycECOL869729:GI9Z-1502-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE1RXW8_ECOUM
AccessionPrimary (citable) accession number: E1RXW8
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)