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E1RN15

- E1RN15_XYLFG

UniProt

E1RN15 - E1RN15_XYLFG

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Protein
Elongation factor Tu
Gene
tuf, XFLM_04485, XFLM_04550
Organism
Xylella fastidiosa (strain GB514)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarityUniRule annotation
Nucleotide bindingi81 – 855GTP By similarityUniRule annotation
Nucleotide bindingi136 – 1394GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP
  2. GTPase activity Source: InterPro
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciXFAS788929:GLMT-848-MONOMER.
XFAS788929:GLMT-860-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:XFLM_04485Imported, XFLM_04550Imported
OrganismiXylella fastidiosa (strain GB514)Imported
Taxonomic identifieri788929 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXylella
ProteomesiUP000008704: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.
OMAiGTEMCMP.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1RN15-1 [UniParc]FASTAAdd to Basket

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MAQDKFKRTK LHVNVGTIGH VDHGKTTLTA ALTKVGAERF GGEFKAYDAI    50
DAAPEEKARG ITISTAHVEY ETEVRHYAHV DCPGHADYVK NMITGAAQMD 100
GAILVCSAAD GPMPQTREHI LLARQVGVPY IVVFLNKADM VDDAELLELV 150
EMEVRELLSK YDFPGDDTPI VRGSALKALE GDQSEIGVPA IIRLAEALDT 200
HIPNPERAID RPFLMPVEDV FSISGRGTVV TGRIECGVIK VGDEVEIVGI 250
RPTSKTIVTG VEMFRKLLDQ GQAGDNAGLL LRGTKRDEVE RGQVLAKPGC 300
IKAHKEFEAE VYVLSKEEGG RHTPFFNGYT PQFYMRTTDI TGKVCLPEGV 350
EMVMPGDNVK VTVSLINPVA MGEGQRFAIR EGGRTVGAGV VSKVIG 396
Length:396
Mass (Da):42,906
Last modified:November 30, 2010 - v1
Checksum:i8ACF62D38F337276
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002165 Genomic DNA. Translation: ADN62865.1.
CP002165 Genomic DNA. Translation: ADN62876.1.
RefSeqiYP_006000231.1. NC_017562.1.
YP_006000242.1. NC_017562.1.

Genome annotation databases

EnsemblBacteriaiADN62865; ADN62865; XFLM_04485.
ADN62876; ADN62876; XFLM_04550.
GeneIDi12588709.
12588721.
KEGGixff:XFLM_04485.
xff:XFLM_04550.
PATRICi43285272. VBIXylFas171671_1095.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002165 Genomic DNA. Translation: ADN62865.1 .
CP002165 Genomic DNA. Translation: ADN62876.1 .
RefSeqi YP_006000231.1. NC_017562.1.
YP_006000242.1. NC_017562.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADN62865 ; ADN62865 ; XFLM_04485 .
ADN62876 ; ADN62876 ; XFLM_04550 .
GeneIDi 12588709.
12588721.
KEGGi xff:XFLM_04485.
xff:XFLM_04550.
PATRICi 43285272. VBIXylFas171671_1095.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.
OMAi GTEMCMP.

Enzyme and pathway databases

BioCyci XFAS788929:GLMT-848-MONOMER.
XFAS788929:GLMT-860-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Unraveling the first Xylella fastidiosa subsp. fastidiosa genome from Texas."
    Schreiber H.L.IV., Koirala M., Lara A., Ojeda M., Dowd S.E., Bextine B., Morano L.
    Southwest. Entomol. 35:479-483(2010)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GB514Imported.
  2. "Unraveling the first Xylella fastidiosa subsp. fastidiosa genome from Texas."
    Dowd S.E., Morano L., Bextine B., Lara A., Koirala M., Schreiber H.L., Ojeda M.
    Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GB514.

Entry informationi

Entry nameiE1RN15_XYLFG
AccessioniPrimary (citable) accession number: E1RN15
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: September 3, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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