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E1RN15

- E1RN15_XYLFG

UniProt

E1RN15 - E1RN15_XYLFG

Protein

Elongation factor Tu

Gene

tuf

Organism
Xylella fastidiosa (strain GB514)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (30 Nov 2010)
      Previous versions | rss
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    Functioni

    This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

    Regions

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Nucleotide bindingi19 – 268GTPUniRule annotation
    Nucleotide bindingi81 – 855GTPUniRule annotation
    Nucleotide bindingi136 – 1394GTPUniRule annotation

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-HAMAP
    3. translation elongation factor activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Elongation factorUniRule annotationImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciXFAS788929:GLMT-848-MONOMER.
    XFAS788929:GLMT-860-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Elongation factor TuUniRule annotation
    Short name:
    EF-TuUniRule annotation
    Gene namesi
    Name:tufUniRule annotation
    Ordered Locus Names:XFLM_04485Imported, XFLM_04550Imported
    OrganismiXylella fastidiosa (strain GB514)Imported
    Taxonomic identifieri788929 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXylella
    ProteomesiUP000008704: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotation

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Structurei

    3D structure databases

    SMRiE1RN15. Positions 2-395.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily.UniRule annotation
    Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000229290.
    KOiK02358.
    OMAiGTEMCMP.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    HAMAPiMF_00118_B. EF_Tu_B.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E1RN15-1 [UniParc]FASTAAdd to Basket

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    MAQDKFKRTK LHVNVGTIGH VDHGKTTLTA ALTKVGAERF GGEFKAYDAI    50
    DAAPEEKARG ITISTAHVEY ETEVRHYAHV DCPGHADYVK NMITGAAQMD 100
    GAILVCSAAD GPMPQTREHI LLARQVGVPY IVVFLNKADM VDDAELLELV 150
    EMEVRELLSK YDFPGDDTPI VRGSALKALE GDQSEIGVPA IIRLAEALDT 200
    HIPNPERAID RPFLMPVEDV FSISGRGTVV TGRIECGVIK VGDEVEIVGI 250
    RPTSKTIVTG VEMFRKLLDQ GQAGDNAGLL LRGTKRDEVE RGQVLAKPGC 300
    IKAHKEFEAE VYVLSKEEGG RHTPFFNGYT PQFYMRTTDI TGKVCLPEGV 350
    EMVMPGDNVK VTVSLINPVA MGEGQRFAIR EGGRTVGAGV VSKVIG 396
    Length:396
    Mass (Da):42,906
    Last modified:November 30, 2010 - v1
    Checksum:i8ACF62D38F337276
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002165 Genomic DNA. Translation: ADN62865.1.
    CP002165 Genomic DNA. Translation: ADN62876.1.
    RefSeqiYP_006000231.1. NC_017562.1.
    YP_006000242.1. NC_017562.1.

    Genome annotation databases

    EnsemblBacteriaiADN62865; ADN62865; XFLM_04485.
    ADN62876; ADN62876; XFLM_04550.
    GeneIDi12588709.
    12588721.
    KEGGixff:XFLM_04485.
    xff:XFLM_04550.
    PATRICi43285272. VBIXylFas171671_1095.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002165 Genomic DNA. Translation: ADN62865.1 .
    CP002165 Genomic DNA. Translation: ADN62876.1 .
    RefSeqi YP_006000231.1. NC_017562.1.
    YP_006000242.1. NC_017562.1.

    3D structure databases

    SMRi E1RN15. Positions 2-395.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADN62865 ; ADN62865 ; XFLM_04485 .
    ADN62876 ; ADN62876 ; XFLM_04550 .
    GeneIDi 12588709.
    12588721.
    KEGGi xff:XFLM_04485.
    xff:XFLM_04550.
    PATRICi 43285272. VBIXylFas171671_1095.

    Phylogenomic databases

    HOGENOMi HOG000229290.
    KOi K02358.
    OMAi GTEMCMP.

    Enzyme and pathway databases

    BioCyci XFAS788929:GLMT-848-MONOMER.
    XFAS788929:GLMT-860-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    HAMAPi MF_00118_B. EF_Tu_B.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004541. Transl_elong_EFTu/EF1A_bac/org.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
    TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Unraveling the first Xylella fastidiosa subsp. fastidiosa genome from Texas."
      Schreiber H.L.IV., Koirala M., Lara A., Ojeda M., Dowd S.E., Bextine B., Morano L.
      Southwest. Entomol. 35:479-483(2010)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: GB514Imported.
    2. "Unraveling the first Xylella fastidiosa subsp. fastidiosa genome from Texas."
      Dowd S.E., Morano L., Bextine B., Lara A., Koirala M., Schreiber H.L., Ojeda M.
      Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: GB514Imported.

    Entry informationi

    Entry nameiE1RN15_XYLFG
    AccessioniPrimary (citable) accession number: E1RN15
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3