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E1RN15

- E1RN15_XYLFG

UniProt

E1RN15 - E1RN15_XYLFG

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Protein

Elongation factor Tu

Gene

tuf

Organism
Xylella fastidiosa (strain GB514)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTPUniRule annotation
Nucleotide bindingi81 – 855GTPUniRule annotation
Nucleotide bindingi136 – 1394GTPUniRule annotation

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-HAMAP
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotation

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciXFAS788929:GLMT-848-MONOMER.
XFAS788929:GLMT-860-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufUniRule annotation
Ordered Locus Names:XFLM_04485Imported, XFLM_04550Imported
OrganismiXylella fastidiosa (strain GB514)Imported
Taxonomic identifieri788929 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaeXylella
ProteomesiUP000008704: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliE1RN15.
SMRiE1RN15. Positions 2-395.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.
OMAiGTEMCMP.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1RN15-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAQDKFKRTK LHVNVGTIGH VDHGKTTLTA ALTKVGAERF GGEFKAYDAI
60 70 80 90 100
DAAPEEKARG ITISTAHVEY ETEVRHYAHV DCPGHADYVK NMITGAAQMD
110 120 130 140 150
GAILVCSAAD GPMPQTREHI LLARQVGVPY IVVFLNKADM VDDAELLELV
160 170 180 190 200
EMEVRELLSK YDFPGDDTPI VRGSALKALE GDQSEIGVPA IIRLAEALDT
210 220 230 240 250
HIPNPERAID RPFLMPVEDV FSISGRGTVV TGRIECGVIK VGDEVEIVGI
260 270 280 290 300
RPTSKTIVTG VEMFRKLLDQ GQAGDNAGLL LRGTKRDEVE RGQVLAKPGC
310 320 330 340 350
IKAHKEFEAE VYVLSKEEGG RHTPFFNGYT PQFYMRTTDI TGKVCLPEGV
360 370 380 390
EMVMPGDNVK VTVSLINPVA MGEGQRFAIR EGGRTVGAGV VSKVIG
Length:396
Mass (Da):42,906
Last modified:November 30, 2010 - v1
Checksum:i8ACF62D38F337276
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002165 Genomic DNA. Translation: ADN62865.1.
CP002165 Genomic DNA. Translation: ADN62876.1.
RefSeqiYP_006000231.1. NC_017562.1.
YP_006000242.1. NC_017562.1.

Genome annotation databases

EnsemblBacteriaiADN62865; ADN62865; XFLM_04485.
ADN62876; ADN62876; XFLM_04550.
GeneIDi12588709.
12588721.
KEGGixff:XFLM_04485.
xff:XFLM_04550.
PATRICi43285272. VBIXylFas171671_1095.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002165 Genomic DNA. Translation: ADN62865.1 .
CP002165 Genomic DNA. Translation: ADN62876.1 .
RefSeqi YP_006000231.1. NC_017562.1.
YP_006000242.1. NC_017562.1.

3D structure databases

ProteinModelPortali E1RN15.
SMRi E1RN15. Positions 2-395.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADN62865 ; ADN62865 ; XFLM_04485 .
ADN62876 ; ADN62876 ; XFLM_04550 .
GeneIDi 12588709.
12588721.
KEGGi xff:XFLM_04485.
xff:XFLM_04550.
PATRICi 43285272. VBIXylFas171671_1095.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.
OMAi GTEMCMP.

Enzyme and pathway databases

BioCyci XFAS788929:GLMT-848-MONOMER.
XFAS788929:GLMT-860-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Unraveling the first Xylella fastidiosa subsp. fastidiosa genome from Texas."
    Schreiber H.L.IV., Koirala M., Lara A., Ojeda M., Dowd S.E., Bextine B., Morano L.
    Southwest. Entomol. 35:479-483(2010)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: GB514Imported.
  2. "Unraveling the first Xylella fastidiosa subsp. fastidiosa genome from Texas."
    Dowd S.E., Morano L., Bextine B., Lara A., Koirala M., Schreiber H.L., Ojeda M.
    Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: GB514Imported.

Entry informationi

Entry nameiE1RN15_XYLFG
AccessioniPrimary (citable) accession number: E1RN15
Entry historyi
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: November 26, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3