E1RLV6 (E1RLV6_XYLFG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Name:	alr EMBL ADN62689.1
Ordered Locus Names:	XFLM_03555 EMBL ADN62689.1

Organism

Xylella fastidiosa (strain GB514) [Complete proteome] [HAMAP] EMBL ADN62689.1

Taxonomic identifier

788929 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xylella › Xylella fastidiosa › Xylella fastidiosa subsp. fastidiosa

Protein attributes

Sequence length	362 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ADN62689.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E1RLV6 [UniParc]. Last modified November 30, 2010. Version 1. Checksum: DC850C59FD1564ED	FASTA	362	39,156
	10 20 30 40 50 60 MRPAHAVIDL DALRHNYRFA RRLGGGKALA VVKADAYGHG AVRCAQALEA EVDGFAVACI 70 80 90 100 110 120 EEALELRQAG IQAPILLLEG FFEVEELELI AKHNLWTVIA SSWQVRALAA FHSPSPIGVW 130 140 150 160 170 180 LKLDSGMHRL GLEPKEFRDA WMSLHSLPQV GEVVLMTHLA RADELDNPRT NEQASVFAHA 190 200 210 220 230 240 SQGMVAPASV CNSSGLLGWA GLYSDWGRPG LMLYGVNPIS QESTSLSGPL RPVMMVYSKL 250 260 270 280 290 300 IAVRELPAGE PVGYGASFVT ERPTRVGVVA MGYADGYPYF AVNGTPLLVD GRVCPLIGRV 310 320 330 340 350 360 SMDMLTVDLT DHPQADVGSQ VQLWGVQPGV AELAAHCNLS AYQLLCGLKR VRRYYLGEMG AV

References

[1]	"Unraveling the first Xylella fastidiosa subsp. fastidiosa genome from Texas." Dowd S.E., Morano L., Bextine B., Lara A., Koirala M., Schreiber H.L., Ojeda M. Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: GB514.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002165 Genomic DNA. Translation: ADN62689.1.
RefSeq	YP_006000055.1. NC_017562.1.
3D structure databases
ProteinModelPortal	E1RLV6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADN62689; ADN62689; XFLM_03555.
GeneID	12588530.
KEGG	xff:XFLM_03555.
PATRIC	43284796. VBIXylFas171671_0863.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000031446.
KO	K01775.
OMA	DELGHHF.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E1RLV6_XYLFG

Accession

Primary (citable) accession number: E1RLV6

Entry history

Integrated into UniProtKB/TrEMBL:	November 30, 2010
Last sequence update:	November 30, 2010
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)