E1RA40 (E1RA40_SPISS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transketolase EMBL ADK83359.1

Gene names

Ordered Locus Names:

Spirs_4286

Organism

Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) [Complete proteome] [HAMAP]

Taxonomic identifier

573413 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Spirochaetes › Spirochaetia › Spirochaetales › Spirochaetaceae › Spirochaeta › Spirochaeta smaragdinae

Protein attributes

Sequence length	663 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Ligand	Magnesium SAAS SAAS005474 Metal-binding SAAS SAAS005474 Thiamine pyrophosphate SAAS SAAS005474
Molecular function	Transferase SAAS SAAS005474
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW transketolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E1RA40 [UniParc]. Last modified November 30, 2010. Version 1. Checksum: 3E4CAFC9C3439022	FASTA	663	71,427
	10 20 30 40 50 60 MNLEALRAAA TSVRSLSMDA IQTANSGHPG LPMGCAELGA LLYGEIMKHY PKNPQWPNRD 70 80 90 100 110 120 RFVLSAGHGS MFLYSLLHLS GYDLPLEELK RFRQIGSKTP GHPEYGYTPG VETTTGPLGA 130 140 150 160 170 180 GLSEAVGMAA AETFLAANFN TADAKVVDHY TWVLAGDGCM MEGISSEASS LAGHLKLGKL 190 200 210 220 230 240 IVFYDSNKIS IEGSTSLAFT EDVAERYRAY GWQVLSGDMY DMEKTAALVE EAKAETGKPS 250 260 270 280 290 300 LIILASIIGK GSPNKAGSSK VHGSPLGVDE VIATRKNLGI PENESFYIAP KAKTYFTEKL 310 320 330 340 350 360 EERKASFDAW NTLFDSWSKA HPELRKKWDR WFEGDRKAAA EAALAAAKMP KYKVGDSVAT 370 380 390 400 410 420 RKAGGAALQA AAAAMENLVG GSADLAPSNN TALPDYGDYS AEERAGRTFH FGVREHAMGA 430 440 450 460 470 480 LANGLSLHGG LRSFAATFLV FSDYMRPQVR LSAIMKEPVV YVFTHDSIFV GEDGPTHQPI 490 500 510 520 530 540 EHAAALRIIP NVHVFRPADA EETVRAWELA LLRDDGPSAL LLTRQNLPVV EKADGSWRDS 550 560 570 580 590 600 MATKGAYIVR ESNGAPKLVV VATGSELSMA LEAVDLTERT DIRVVSMPCK ERFLALSDDE 610 620 630 640 650 660 KAKLLPKGAE VYATEAGVSD GWEAVTGCRD RVFGINRFGE SGPGEAVAED IGFTAKAFAE MLK

References

[1]

"Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228)." Mavromatis K., Yasawong M., Chertkov O., Lapidus A., Lucas S., Nolan M., Glavina Del Rio T., Tice H., Cheng J., Pitluck S., Liolios K., Ivanova N., Tapia R., Han C., Bruce D., Goodwin L., Pati A., Chen A. , Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Detter J., Rohde M., Brambilla E., Spring S., Goker M., Sikorski J., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Klenk H., Kyrpides N. Stand. Genomic Sci. 3:136-144(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 11293 / JCM 15392 / SEBR 4228.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002116 Genomic DNA. Translation: ADK83359.1.
RefSeq	YP_003805953.1. NC_014364.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADK83359; ADK83359; Spirs_4286.
GeneID	9492415.
KEGG	ssm:Spirs_4286.
PATRIC	42532710. VBISpiSma89994_4386.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000225954.
KO	K00615.
OMA	PCKERFL.
Family and domain databases
Gene3D	3.40.50.920. 1 hit.
InterPro	IPR009014. Transketo_C/Pyr-ferredox_oxred. IPR015941. Transketolase-like_C. IPR005475. Transketolase-like_Pyr-bd. IPR005478. Transketolase_bac-like. IPR020826. Transketolase_BS. IPR005476. Transketolase_C. IPR005474. Transketolase_N. [Graphical view]
Pfam	PF02779. Transket_pyr. 1 hit. PF02780. Transketolase_C. 1 hit. PF00456. Transketolase_N. 1 hit. [Graphical view]
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
SUPFAM	SSF52922. Transketo_C_like. 1 hit.
TIGRFAMs	TIGR00232. tktlase_bact. 1 hit.
PROSITE	PS00801. TRANSKETOLASE_1. 1 hit. PS00802. TRANSKETOLASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E1RA40_SPISS

Accession

Primary (citable) accession number: E1RA40

Entry history

Integrated into UniProtKB/TrEMBL:	November 30, 2010
Last sequence update:	November 30, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)