E1QY34 (E1QY34_OLSUV) Unreviewed, UniProtKB/TrEMBL
Last modified
May 29, 2013.
Version 23.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Alanine racemase HAMAP-Rule MF_01201 RuleBase RU000608 EC=5.1.1.1 HAMAP-Rule MF_01201 RuleBase RU000608 | ||||
| Gene names |
| ||||
| Organism | Olsenella uli (strain ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C) (Lactobacillus uli) [Complete proteome] [HAMAP] EMBL ADK67298.1 | ||||
| Taxonomic identifier | 633147 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Coriobacteridae › Coriobacteriales › Coriobacterineae › Coriobacteriaceae › Olsenella › ![]() |
Protein attributes
| Sequence length | 386 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201 |
| Catalytic activity | L-alanine = D-alanine. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622 |
| Cofactor | Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622 |
| Pathway | Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 HAMAP-Rule MF_01201 SAAS SAAS020622 |
| Sequence similarities | Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201 |
Ontologies
| Keywords | |
|---|---|
| Ligand | Pyridoxal phosphate HAMAP-Rule MF_01201 RuleBase RU000608 SAAS SAAS020622 |
| Molecular function | Isomerase SAAS SAAS020622 HAMAP-Rule MF_01201 RuleBase RU000608 EMBL ADK67298.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway |
| Molecular_function | alanine racemase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 43 | 1 | Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201 | ||||||
| Active site | 270 | 1 | Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201 | ||||||
| Binding site | 141 | 1 | Substrate By similarity HAMAP-Rule MF_01201 | ||||||
| Binding site | 319 | 1 | Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201 | ||||||
Amino acid modifications | |||||||||
| Modified residue | 43 | 1 | N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of Olsenella uli type strain (VPI D76D-27C)." Goker M., Held B., Lucas S., Nolan M., Yasawong M., Glavina del Rio T., Tice H., Cheng J., Bruce D., Detter J., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N. Lapidus A.Stand. Genomic Sci. 3:76-84(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49627 / DSM 7084 / CIP 109912 / JCM 12494 / VPI D76D-27C. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP002106 Genomic DNA. Translation: ADK67298.1. |
| RefSeq | YP_003800178.1. NC_014363.1. |
3D structure databases | |
| ProteinModelPortal | E1QY34. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ADK67298; ADK67298; Olsu_0166. |
| GeneID | 9500826. |
| KEGG | ols:Olsu_0166. |
| PATRIC | 42402227. VBIOlsUli28891_0164. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000031444. |
| KO | K01775. |
Enzyme and pathway databases | |
| BioCyc | OULI633147:GHMD-174-MONOMER. |
| UniPathway | UPA00042; UER00497. |
Family and domain databases | |
| Gene3D | 2.40.37.10. 1 hit. |
| HAMAP | MF_01201. Ala_racemase. |
| InterPro | IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view] |
| Pfam | PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view] |
| PRINTS | PR00992. ALARACEMASE. |
| SMART | SM01005. Ala_racemase_C. 1 hit. [Graphical view] |
| SUPFAM | SSF50621. Racem_decarbox_C. 1 hit. |
| TIGRFAMs | TIGR00492. alr. 1 hit. |
| PROSITE | PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | E1QY34_OLSUV | ||||||||
| Accession | Primary (citable) accession number: E1QY34 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
