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Protein

D-alanine--D-alanine ligase

Gene

Deba_0210

Organism
Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cell wall formation.SAAS annotation

Catalytic activityi

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotation

Cofactori

Protein has several cofactor binding sites:
  • Mg2+SAAS annotation
  • Mn2+SAAS annotation

Pathwayi: peptidoglycan biosynthesis

This protein is involved in the pathway peptidoglycan biosynthesis, which is part of Cell wall biogenesis.SAAS annotation
View all proteins of this organism that are known to be involved in the pathway peptidoglycan biosynthesis and in Cell wall biogenesis.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseSAAS annotationImported
Biological processCell shape, Cell wall biogenesis/degradationSAAS annotation, Peptidoglycan synthesisSAAS annotation
LigandATP-bindingPROSITE-ProRule annotationSAAS annotation, MagnesiumSAAS annotation, ManganeseSAAS annotation, Metal-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciDBAA644282:G1GM5-208-MONOMER
UniPathwayiUPA00219

Names & Taxonomyi

Protein namesi
Recommended name:
D-alanine--D-alanine ligaseSAAS annotation (EC:6.3.2.4SAAS annotation)
Gene namesi
Ordered Locus Names:Deba_0210Imported
OrganismiDesulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14)Imported
Taxonomic identifieri644282 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfarculalesDesulfarculaceaeDesulfarculus
Proteomesi
  • UP000009047 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm SAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi644282.Deba_0210

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini109 – 322ATP-graspInterPro annotationAdd BLAST214

Sequence similaritiesi

Belongs to the D-alanine--D-alanine ligase family.SAAS annotation

Phylogenomic databases

eggNOGiENOG4108PB3 Bacteria
COG1181 LUCA
HOGENOMiHOG000011594
KOiK01921
OMAiVGYRAKW
OrthoDBiPOG091H00GT

Family and domain databases

Gene3Di3.30.1490.20, 1 hit
InterProiView protein in InterPro
IPR011761 ATP-grasp
IPR013815 ATP_grasp_subdomain_1
IPR011095 Dala_Dala_lig_C
PfamiView protein in Pfam
PF07478 Dala_Dala_lig_C, 1 hit
PROSITEiView protein in PROSITE
PS50975 ATP_GRASP, 1 hit

Sequencei

Sequence statusi: Complete.

E1QG75-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVVVLHDMA SPDAAPDLAD NVVQASQVLA ALGRLGHRAQ GLAFGPEVDQ
60 70 80 90 100
TRQALEELRP DVVFNLVETP LGMARMIHLA PLLLERLRLR YTGAGARGML
110 120 130 140 150
LTSQKLLAKK AMRESNLPTP DWCGPRDDGL PFSPLRRYIV KSVWEHGSVG
160 170 180 190 200
LDDHSIIKPL GRAAMRAAIA QRGKALGGDC FAEAYIDGRE FNIAILAGSR
210 220 230 240 250
GPEVLPPAEI TFEGFQPGKP HIVGYRAKWV EDSHEYNHTP RRFDFEPRDA
260 270 280 290 300
ELLARLKAMS LRCWRLFGLR GWARVDFRVD RKGRPFILEV NANPCLADDA
310 320 330 340
GFMAAARRAG LDQTIVVWRI LGSASRGRRR GCAVEKTGLA
Length:340
Mass (Da):37,568
Last modified:November 30, 2010 - v1
Checksum:i9754DAC7F76796F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002085 Genomic DNA Translation: ADK83587.1
RefSeqiWP_013257043.1, NC_014365.1

Genome annotation databases

EnsemblBacteriaiADK83587; ADK83587; Deba_0210
KEGGidbr:Deba_0210

Similar proteinsi

Entry informationi

Entry nameiE1QG75_DESB2
AccessioniPrimary (citable) accession number: E1QG75
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: April 25, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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