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E1PNC2 (E1PNC2_CAMJM) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length282 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADN91795.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E1PNC2 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: 7A5C9A31B725A805

FASTA28232,517
        10         20         30         40         50         60 
MRFIFLICCA CLVFANEILL LSKFDKQDFN SKDFNAYLMS EKLDGVRGIW DGKYLKTRQN 

        70         80         90        100        110        120 
YKIKTPDFFT KNFPPFAIDG ELWIARNKFD EISALIRSGD SNLTLWKEVT YNIFDVPNAC 

       130        140        150        160        170        180 
EEFQISTCTL KNRLAVLEEY LQKYPSAYIK IIPQIPVENQ NNLNQFYESI IKNQGEGIVI 

       190        200        210        220        230        240 
RKNLSPYEKG RSKNAMKLKP YDDAECELVG FRKGKGKFEN QVGALLCKMP NGQIIKIGSG 

       250        260        270        280 
LKDEDRKNPP KIGSIVTYKF NGLTKNSLPR FPVFLRIRDE NP 

« Hide

References

[1]"Genomic characterization of Campylobacter jejuni strain M1."
Friis C., Wassenaar T.M., Javed M.A., Snipen L., Lagesen K., Hallin P.F., Newell D.G., Toszeghy M., Ridley A., Manning G., Ussery D.W.
PLoS ONE 5:e12253-e12253(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M1 / 99/308.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001900 Genomic DNA. Translation: ADN91795.1.
RefSeqYP_005658545.1. NC_017280.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN91795; ADN91795; CJM1_1615.
GeneID12249171.
KEGGcjm:CJM1_1615.
PATRIC42815666. VBICamJej14675_1600.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000293070.
KOK01971.
OMAVRGYWDG.

Enzyme and pathway databases

BioCycCJEJ645464:GLA6-1610-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE1PNC2_CAMJM
AccessionPrimary (citable) accession number: E1PNC2
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)