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E1PJ79 (E1PJ79_ECOAB) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL ADN48451.1
Gene names
Name:malS EMBL ADN48451.1
Ordered Locus Names:ECABU_c40140 EMBL ADN48451.1
OrganismEscherichia coli OR:K5:H- (strain ABU 83972) [Complete proteome] [HAMAP] EMBL ADN48451.1
Taxonomic identifier655817 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length676 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E1PJ79 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: 77F46F02CAC3AD4A

FASTA67675,848
        10         20         30         40         50         60 
MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLM LNFDQQCWQP 

        70         80         90        100        110        120 
ADAIKLNQML SLQPCSNTPP QWRLFRDGEY TLQLDTRSGT PTLMISLQNT VEPVASLVRE 

       130        140        150        160        170        180 
CPKWDGLPLT LDVSATFAEG AAVRDYYSQQ IAIVKNGQIT LQPAATSNGL LLLERAETDT 

       190        200        210        220        230        240 
SAPFDWHNAT VYFVLTDRFE NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ 

       250        260        270        280        290        300 
LGVNALWISA PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGSE ADLRTLVDSA 

       310        320        330        340        350        360 
HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDELK KTLGERWSDW KPAAGQTWHS 

       370        380        390        400        410        420 
FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS LAFLPDIKTE STSASGLPVF 

       430        440        450        460        470        480 
YKNKTDTHAK DIDGFTPRDY LTHWLSQWVR DYGIDGFRVD TAKHVELPAW QQLKTEASAA 

       490        500        510        520        530        540 
LREWKKANPD KALDDKPFWM TGEAWGHGVM QSDYYRHDFD AMINFDYQEQ AAKAVDCLAQ 

       550        560        570        580        590        600 
MDTTWQQMAE KLQDFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 

       610        620        630        640        650        660 
PTGSDPLQGT RSDMNWQDVS GKSAASVAHW QKISQFRARH PAIGAGKQTT LSLKQGYGFV 

       670 
REHGDDKVLV IWAGQQ 

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References

[1]"Host imprints on bacterial genomes--rapid, divergent evolution in individual patients."
Zdziarski J., Brzuszkiewicz E., Wullt B., Liesegang H., Biran D., Voigt B., Gronberg-Hernandez J., Ragnarsdottir B., Hecker M., Ron E.Z., Daniel R., Gottschalk G., Hacker J., Svanborg C., Dobrindt U.
PLoS Pathog. 6:e1001078-e1001078(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ABU 83972 EMBL ADN48451.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001671 Genomic DNA. Translation: ADN48451.1.
RefSeqYP_006107982.1. NC_017631.1.

3D structure databases

ProteinModelPortalE1PJ79.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN48451; ADN48451; ECABU_c40140.
GeneID12729305.
KEGGeab:ECABU_c40140.
PATRIC42952991. VBIEscCol35126_4195.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000273912.
KOK01176.
OMAGQNWHSF.

Enzyme and pathway databases

BioCycECOL655817:GI9N-3906-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameE1PJ79_ECOAB
AccessionPrimary (citable) accession number: E1PJ79
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: April 16, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)