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E1PB64 (E1PB64_ECOAB) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase [Cu-Zn] RuleBase RU000393
EC=1.15.1.1 RuleBase RU000393
Gene names
Name:sodC EMBL ADN46444.1
Ordered Locus Names:ECABU_c18990 EMBL ADN46444.1
OrganismEscherichia coli OR:K5:H- (strain ABU 83972) [Complete proteome] [HAMAP] EMBL ADN46444.1
Taxonomic identifier655817 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia ›

Protein attributes

Sequence length178 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000393

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000393

Cofactor

Binds 1 copper ion per subunit By similarity. RuleBase RU000393

Binds 1 zinc ion per subunit By similarity. RuleBase RU000393

Sequence similarities

Belongs to the Cu-Zn superoxide dismutase family. RuleBase RU000393

Sequences

Sequence LengthMass (Da)Tools
E1PB64 [UniParc].

Last modified November 30, 2010. Version 1.
Checksum: DC43B99359649615

FASTA17818,123
        10         20         30         40         50         60 
MNGGPMKRFS LAILALVVAT GAQAASEKVE MNLVTSQGVG QSIGSVTITE TDKGLEFSPD 

        70         80         90        100        110        120 
LKALPPGEHG FHIHAKGSCQ PATKDGKASA AESAGGHLDP QNTGKHEGPE GAGHLGDLPA 

       130        140        150        160        170 
LVVNNDGKAT DAVIAPRLKS LDEVKDKALM VHVGGDNMSD QPKPLGGGGE RYACGVIK

« Hide

References

[1]"Host imprints on bacterial genomes--rapid, divergent evolution in individual patients."
Zdziarski J., Brzuszkiewicz E., Wullt B., Liesegang H., Biran D., Voigt B., Gronberg-Hernandez J., Ragnarsdottir B., Hecker M., Ron E.Z., Daniel R., Gottschalk G., Hacker J., Svanborg C., Dobrindt U.
PLoS Pathog. 6:e1001078-e1001078(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ABU 83972 EMBL ADN46444.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001671 Genomic DNA. Translation: ADN46444.1.
RefSeqYP_006105975.1. NC_017631.1.

3D structure databases

ProteinModelPortalE1PB64.
SMRE1PB64. Positions 25-178.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADN46444; ADN46444; ECABU_c18990.
GeneID12727256.
KEGGeab:ECABU_c18990.
PATRIC42948502. VBIEscCol35126_1985.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000263449.
KOK04565.
OMANTNSHQG.

Family and domain databases

Gene3D2.60.40.200. 1 hit.
InterProIPR024134. SOD_Cu/Zn_/chaperones.
IPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PANTHERPTHR10003. PTHR10003. 1 hit.
PfamPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMSSF49329. SOD_Cu_Zn. 1 hit.
PROSITEPS00332. SOD_CU_ZN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE1PB64_ECOAB
AccessionPrimary (citable) accession number: E1PB64
Entry history
Integrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: November 30, 2010
Last modified: May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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