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E1C5D5 (E1C5D5_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1037 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Contains 1 ENTH (epsin N-terminal homology) domain. SAAS SAAS008942

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSGALP00000001365

Sequences

Sequence LengthMass (Da)Tools
E1C5D5 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: E9DB3461E1ADDDF7

FASTA1,037115,901
        10         20         30         40         50         60 
MDRVSSSMRQ AANPLPRVLS RRAGGSGPEA ERESFERAQT VSINKAINTQ EVAVKEKHAR 

        70         80         90        100        110        120 
TCILGTHHEK GAQTFWSVVN RLPLSGNAVL CWKFCHVFHK LLRDGHSNVL KDSVRYKNEL 

       130        140        150        160        170        180 
SDMSRMWGHL SEGYGQLCSI YLKLLRTKME FHTKNPRFPG NLQMSDRQLD EAGENDVNNF 

       190        200        210        220        230        240 
FQLTVEMFDY LECELNLFQT VFSSLDMSRS VSVTAAGQCR LAPLIQVILD CSHLYDYTVK 

       250        260        270        280        290        300 
LLFKLHSCLP ADTLQGHRDR FLEQFRKLKD LFYRSSNLQY FKRLIQIPQL PENPPNFLRA 

       310        320        330        340        350        360 
SALSEHISPV VVIPAEASSP DSEPITDLVE METASQSLFD NKFDDIFGSS FSSDPFNFNS 

       370        380        390        400        410        420 
QNGMNKDDKD RLIEQLYREI GALKEELESF KAESERRGLQ LRGRISELEA ELAEQRHLKQ 

       430        440        450        460        470        480 
QALDDSEFLR TELEELKKQR EDTEKAQRSL TEIERRAQAN EQRYSKLKEK YSELVQNHAD 

       490        500        510        520        530        540 
LLRKNAEVTK QVTVARQAQG DVEREKKELE DSFQRVSEQS QRKSQEQAEV LETLKQELAA 

       550        560        570        580        590        600 
SKQELQVLQG TLETTIQVGA EQNTRIAGLE QERDSLSHAA EQRSKEMAAL QAELQQLRDA 

       610        620        630        640        650        660 
LSSEKESAER TLQQRRAEEQ FALLQGSARE AERMVQDALS RLEDPAHISC TGSADYLLSR 

       670        680        690        700        710        720 
TSAASECIER LQDAHSKYLT NRTDVSTLLP CVALFAHLIS DTILQGSATS HMAPMEPADR 

       730        740        750        760        770        780 
LLETCKQCGS EATSYLSSLQ DPGSVASANC TAVTNCLHRI SAIGEELRPR GLDVEQEELG 

       790        800        810        820        830        840 
DLVDKEMAAT SAAIETAAAR IEEMLSKARA GDTGVKLEVN ERILGSCTGL MQAIQVLVLA 

       850        860        870        880        890        900 
SKDLQREIVE SGRGAASPKE FYAKNSRWTE GLISASKAVG WGATVMVDAA DLVVQGKGKF 

       910        920        930        940        950        960 
EELMVCSHEI AASTAQLVAA SKVKADKDSS NLSKLQQASR GVNQATAGVV ASTKSGKSQI 

       970        980        990       1000       1010       1020 
EEKDSMDFSS MTLTQIKRQE MDSQVRVLEL ENQLQKERQK LGELRKKHYE LAGVAEGWEE 

      1030 
DGRAHCPTAP DGPSPSQ 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000001365.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000001365.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AADN02026103 Genomic DNA. No translation available.
AADN02026104 Genomic DNA. No translation available.
AADN02026105 Genomic DNA. No translation available.
IPIIPI00599588.

3D structure databases

ProteinModelPortalE1C5D5.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000001367; ENSGALP00000001365; ENSGALG00000000930.

Phylogenomic databases

GeneTreeENSGT00550000074542.

Gene expression databases

ArrayExpressE1C5D5.

Family and domain databases

Gene3D1.25.40.90. 1 hit.
InterProIPR011417. ANTH_dom.
IPR016024. ARM-type_fold.
IPR008942. ENTH_VHS.
IPR013809. Epsin-like_N.
IPR002558. ILWEQ_dom.
[Graphical view]
PfamPF07651. ANTH. 1 hit.
PF01608. I_LWEQ. 1 hit.
[Graphical view]
ProDomPD011820. ILWEQ. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00273. ENTH. 1 hit.
SM00307. ILWEQ. 1 hit.
[Graphical view]
SUPFAMSSF48371. ARM-type_fold. 1 hit.
SSF48464. ENTH_VHS. 1 hit.
PROSITEPS50942. ENTH. 1 hit.
PS50945. I_LWEQ. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE1C5D5_CHICK
AccessionPrimary (citable) accession number: E1C5D5
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)