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E1C5B6

- E1C5B6_CHICK

UniProt

E1C5B6 - E1C5B6_CHICK

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Protein
Submitted name: Uncharacterized protein
Gene
JPH3
Organism
Gallus gallus (Chicken)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium-release channel activity Source: Ensembl
Complete GO annotation...

GO - Biological processi

  1. exploration behavior Source: Ensembl
  2. learning Source: Ensembl
  3. locomotion Source: Ensembl
  4. memory Source: Ensembl
  5. neuromuscular process controlling balance Source: Ensembl
  6. regulation of neuronal synaptic plasticity Source: Ensembl
  7. regulation of ryanodine-sensitive calcium-release channel activity Source: Ensembl
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:JPH3Imported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalliformesPhasianidaePhasianinaeGallus
ProteomesiUP000000539: Chromosome 11

Subcellular locationi

GO - Cellular componenti

  1. endoplasmic reticulum membrane Source: Ensembl
  2. junctional membrane complex Source: Ensembl
  3. plasma membrane Source: Ensembl
Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiE1C5B6.

Family & Domainsi

Keywords - Domaini

RepeatSAAS annotations

Phylogenomic databases

GeneTreeiENSGT00730000110639.
OMAiHPQKRRY.
OrthoDBiEOG7J4463.
PhylomeDBiE1C5B6.
TreeFamiTF317210.

Family and domain databases

InterProiIPR017191. Junctophilin.
IPR003409. MORN.
[Graphical view]
PfamiPF02493. MORN. 8 hits.
[Graphical view]
PIRSFiPIRSF037387. Junctophilin. 1 hit.
SMARTiSM00698. MORN. 7 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1C5B6-1 [UniParc]FASTAAdd to Basket

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MSSGGRFNFD DGGSYCGGWE DGKAHGHGIC TGPKGQGEYS GSWSHGFEVL    50
GVYTWPSGNT YQGTWAQGKR HGIGMESKGK WVYKGEWTHG FKGRYGVREC 100
TGNGAKYEGT WSNGLQDGYG TETYSDGGTY QGQWVGGMRQ GYGVRQSVPY 150
GMAAVIRSPL RTSINSLRSE HTNGTALHPD SSPAVAGSPA VSRGGFVLMA 200
HSDAEILKSK KKGIFRRSLL SGLKLRKSES KSSLASQRSK QSSFRSEAGM 250
STVSSTASDI NSTISLGEGE AELSVIEDDI DATTTEIYVG EWKNDKRSGF 300
GVSQRSDGLK YEGEWANNKR HGYGCMTFPD GTKEEGKYKQ NVLVSGKRKN 350
LIPLRASKIR EKVDRAVEAA ERAATIAKQK AEIAASRTSH SRAKAEAAMT 400
AAQKAQEEAR IARITAKEFS PSFQHRENGL ECQRPKRQNS SDDIEVLSTG 450
TPLQQESPEL YRKGTTPSDL TPEDSPLQSF PASPSSTPPL GPSCRNKSAH 500
FSRQVSVDEE RGGEIQMLLE GRGGDYLRPN SWSEEKAGGT RGVRSGTLRS 550
GSANVPEDYR GRSGGHKHSA SNHKQRERWT DSPATVSWTS HHRSHNHSSG 600
SSKLLELDEE KMSNYEMEMK PLMRMDSYMQ EIHTQKRHYS KGGACRSMAD 650
DHRGEERGFG VQRLRSKSQN KENFRPASSA EPTVQKLENL RFGDKAEPRL 700
LRWDLTFSPP QKSLPVALES EEDSGDALKS STGSAPILVV MVILLNIGVA 750
ILFINFFI 758
Length:758
Mass (Da):83,083
Last modified:November 2, 2010 - v1
Checksum:i5CF4C0668259750A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AADN03006177 Genomic DNA. No translation available.
AADN03006188 Genomic DNA. No translation available.
AADN03006234 Genomic DNA. No translation available.
RefSeqiXP_414192.1. XM_414192.4.

Genome annotation databases

EnsembliENSGALT00000009303; ENSGALP00000009289; ENSGALG00000005791.
GeneIDi415830.
KEGGigga:415830.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AADN03006177 Genomic DNA. No translation available.
AADN03006188 Genomic DNA. No translation available.
AADN03006234 Genomic DNA. No translation available.
RefSeqi XP_414192.1. XM_414192.4.

3D structure databases

ModBasei Search...

Proteomic databases

PRIDEi E1C5B6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSGALT00000009303 ; ENSGALP00000009289 ; ENSGALG00000005791 .
GeneIDi 415830.
KEGGi gga:415830.

Organism-specific databases

CTDi 57338.

Phylogenomic databases

GeneTreei ENSGT00730000110639.
OMAi HPQKRRY.
OrthoDBi EOG7J4463.
PhylomeDBi E1C5B6.
TreeFami TF317210.

Miscellaneous databases

NextBioi 20819374.
PROi E1C5B6.

Family and domain databases

InterProi IPR017191. Junctophilin.
IPR003409. MORN.
[Graphical view ]
Pfami PF02493. MORN. 8 hits.
[Graphical view ]
PIRSFi PIRSF037387. Junctophilin. 1 hit.
SMARTi SM00698. MORN. 7 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
    International Chicken Genome Sequencing Consortium
    Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A.
    , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
    Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Red jungle fowlImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: Red jungle fowlImported.

Entry informationi

Entry nameiE1C5B6_CHICK
AccessioniPrimary (citable) accession number: E1C5B6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: July 9, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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