Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

E1C5B6 (E1C5B6_CHICK) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length758 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSGALP00000009289

Sequences

Sequence LengthMass (Da)Tools
E1C5B6 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: 5CF4C0668259750A

FASTA75883,083
        10         20         30         40         50         60 
MSSGGRFNFD DGGSYCGGWE DGKAHGHGIC TGPKGQGEYS GSWSHGFEVL GVYTWPSGNT 

        70         80         90        100        110        120 
YQGTWAQGKR HGIGMESKGK WVYKGEWTHG FKGRYGVREC TGNGAKYEGT WSNGLQDGYG 

       130        140        150        160        170        180 
TETYSDGGTY QGQWVGGMRQ GYGVRQSVPY GMAAVIRSPL RTSINSLRSE HTNGTALHPD 

       190        200        210        220        230        240 
SSPAVAGSPA VSRGGFVLMA HSDAEILKSK KKGIFRRSLL SGLKLRKSES KSSLASQRSK 

       250        260        270        280        290        300 
QSSFRSEAGM STVSSTASDI NSTISLGEGE AELSVIEDDI DATTTEIYVG EWKNDKRSGF 

       310        320        330        340        350        360 
GVSQRSDGLK YEGEWANNKR HGYGCMTFPD GTKEEGKYKQ NVLVSGKRKN LIPLRASKIR 

       370        380        390        400        410        420 
EKVDRAVEAA ERAATIAKQK AEIAASRTSH SRAKAEAAMT AAQKAQEEAR IARITAKEFS 

       430        440        450        460        470        480 
PSFQHRENGL ECQRPKRQNS SDDIEVLSTG TPLQQESPEL YRKGTTPSDL TPEDSPLQSF 

       490        500        510        520        530        540 
PASPSSTPPL GPSCRNKSAH FSRQVSVDEE RGGEIQMLLE GRGGDYLRPN SWSEEKAGGT 

       550        560        570        580        590        600 
RGVRSGTLRS GSANVPEDYR GRSGGHKHSA SNHKQRERWT DSPATVSWTS HHRSHNHSSG 

       610        620        630        640        650        660 
SSKLLELDEE KMSNYEMEMK PLMRMDSYMQ EIHTQKRHYS KGGACRSMAD DHRGEERGFG 

       670        680        690        700        710        720 
VQRLRSKSQN KENFRPASSA EPTVQKLENL RFGDKAEPRL LRWDLTFSPP QKSLPVALES 

       730        740        750 
EEDSGDALKS STGSAPILVV MVILLNIGVA ILFINFFI 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution."
International Chicken Genome Sequencing Consortium
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C., Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E., Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W., Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A. expand/collapse author list , Kremitzki C., Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E., Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J., Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M., Paton B., Smith J., Morrice D., Daniels L., Tempest H.G., Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V., Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J., van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J., Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H., Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K., Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E., Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M., Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S., Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J., Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H., Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C., Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C., Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P., King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S., Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S., Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S., Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z., Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J., Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z., Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M., Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O., Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J., Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G., Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D., Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G., Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A., Mardis E.R., Wilson R.K.
Nature 432:695-716(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Red jungle fowl Ensembl ENSGALP00000009289.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Red jungle fowl Ensembl ENSGALP00000009289.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AADN03006177 Genomic DNA. No translation available.
AADN03006188 Genomic DNA. No translation available.
AADN03006234 Genomic DNA. No translation available.
RefSeqXP_414192.1. XM_414192.4.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEE1C5B6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSGALT00000009303; ENSGALP00000009289; ENSGALG00000005791.
GeneID415830.
KEGGgga:415830.

Organism-specific databases

CTD57338.

Phylogenomic databases

GeneTreeENSGT00730000110639.
OMAHPQKRRY.
OrthoDBEOG7J4463.
PhylomeDBE1C5B6.
TreeFamTF317210.

Family and domain databases

InterProIPR017191. Junctophilin.
IPR003409. MORN.
[Graphical view]
PfamPF02493. MORN. 8 hits.
[Graphical view]
PIRSFPIRSF037387. Junctophilin. 1 hit.
SMARTSM00698. MORN. 7 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio20819374.
PROE1C5B6.

Entry information

Entry nameE1C5B6_CHICK
AccessionPrimary (citable) accession number: E1C5B6
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: April 16, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)