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Protein
Submitted name:

Uncharacterized protein

Gene

TRAF1

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. zinc ion binding Source: InterPro

GO - Biological processi

  1. positive regulation of NF-kappaB transcription factor activity Source: Ensembl
  2. regulation of extrinsic apoptotic signaling pathway Source: Ensembl
  3. signal transduction Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:TRAF1Imported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
ProteomesiUP000009136: Chromosome 8

PTM / Processingi

Proteomic databases

PRIDEiE1BMI8.

Family & Domainsi

Sequence similaritiesi

Contains 1 MATH domain.UniRule annotation

Phylogenomic databases

GeneTreeiENSGT00550000074359.
InParanoidiE1BMI8.
KOiK03172.
OMAiHFMKEKL.
OrthoDBiEOG7966G5.
TreeFamiTF321154.

Family and domain databases

InterProiIPR002083. MATH.
IPR012227. TNF_rcpt--assoc_TRAF.
IPR008974. TRAF-like.
IPR027136. TRAF1.
[Graphical view]
PANTHERiPTHR10131:SF29. PTHR10131:SF29. 1 hit.
PfamiPF00917. MATH. 1 hit.
[Graphical view]
PIRSFiPIRSF015614. TRAF. 1 hit.
SMARTiSM00061. MATH. 1 hit.
[Graphical view]
SUPFAMiSSF49599. SSF49599. 1 hit.
PROSITEiPS50144. MATH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1BMI8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASGSASSPR PAPDENEFPF GCPPTACQDP PEPGPVCCAV CLSEKVRNDE
60 70 80 90 100
DRICPKCKGD DTPSESPGSL LSQEKDHPEV AEAGVGCPFA GVGCSFKGSP
110 120 130 140 150
KFMEEHEVTS QAAHLNLLLG FMKQWKAQLG SGLGYGPMAL ERNLSDLQLQ
160 170 180 190 200
GAVEVAGDLE VDCYRAPCSE SQDELALHHF MKEKLLNELE GKLCVFENIV
210 220 230 240 250
AVLNKEVEAS HLALAASIHQ SQLDREHILS LEQRVLELQQ TLAQKDQALG
260 270 280 290 300
KLEQSLRLVE EASYDGTFLW KITNVTRRCH ESACGRTVSL FSPAFYTAKY
310 320 330 340 350
GYKLCLRLYL NGDGTGKRTH LSLFIVIMRG EYDALLPWPF RNKVTFMLLD
360 370 380 390 400
QNNREHAIDA FRPDLNSASF QRPQSETNVA SGCPLFFPLN KLQSPKHAYV
410
KDDTMFVKCV VDTNT
Length:415
Mass (Da):45,887
Last modified:November 16, 2011 - v2
Checksum:iA521887128F2CDB9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02024787 Genomic DNA. No translation available.
RefSeqiNP_001179730.1. NM_001192801.1.
XP_005210651.1. XM_005210594.1.
XP_005210652.1. XM_005210595.1.
UniGeneiBt.42593.

Genome annotation databases

EnsembliENSBTAT00000043659; ENSBTAP00000041215; ENSBTAG00000003012.
GeneIDi540944.
KEGGibta:540944.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02024787 Genomic DNA. No translation available.
RefSeqiNP_001179730.1. NM_001192801.1.
XP_005210651.1. XM_005210594.1.
XP_005210652.1. XM_005210595.1.
UniGeneiBt.42593.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiE1BMI8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000043659; ENSBTAP00000041215; ENSBTAG00000003012.
GeneIDi540944.
KEGGibta:540944.

Organism-specific databases

CTDi7185.

Phylogenomic databases

GeneTreeiENSGT00550000074359.
InParanoidiE1BMI8.
KOiK03172.
OMAiHFMKEKL.
OrthoDBiEOG7966G5.
TreeFamiTF321154.

Miscellaneous databases

NextBioi20878924.

Family and domain databases

InterProiIPR002083. MATH.
IPR012227. TNF_rcpt--assoc_TRAF.
IPR008974. TRAF-like.
IPR027136. TRAF1.
[Graphical view]
PANTHERiPTHR10131:SF29. PTHR10131:SF29. 1 hit.
PfamiPF00917. MATH. 1 hit.
[Graphical view]
PIRSFiPIRSF015614. TRAF. 1 hit.
SMARTiSM00061. MATH. 1 hit.
[Graphical view]
SUPFAMiSSF49599. SSF49599. 1 hit.
PROSITEiPS50144. MATH. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HerefordImported.
  2. Ensembl
    Submitted (JUL-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: HerefordImported.

Entry informationi

Entry nameiE1BMI8_BOVIN
AccessioniPrimary (citable) accession number: E1BMI8
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 16, 2011
Last modified: January 7, 2015
This is version 25 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.