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E1BMI8 (E1BMI8_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length415 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 MATH domain. RuleBase RU004402

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000041215

Sequences

Sequence LengthMass (Da)Tools
E1BMI8 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: A521887128F2CDB9

FASTA41545,887
        10         20         30         40         50         60 
MASGSASSPR PAPDENEFPF GCPPTACQDP PEPGPVCCAV CLSEKVRNDE DRICPKCKGD 

        70         80         90        100        110        120 
DTPSESPGSL LSQEKDHPEV AEAGVGCPFA GVGCSFKGSP KFMEEHEVTS QAAHLNLLLG 

       130        140        150        160        170        180 
FMKQWKAQLG SGLGYGPMAL ERNLSDLQLQ GAVEVAGDLE VDCYRAPCSE SQDELALHHF 

       190        200        210        220        230        240 
MKEKLLNELE GKLCVFENIV AVLNKEVEAS HLALAASIHQ SQLDREHILS LEQRVLELQQ 

       250        260        270        280        290        300 
TLAQKDQALG KLEQSLRLVE EASYDGTFLW KITNVTRRCH ESACGRTVSL FSPAFYTAKY 

       310        320        330        340        350        360 
GYKLCLRLYL NGDGTGKRTH LSLFIVIMRG EYDALLPWPF RNKVTFMLLD QNNREHAIDA 

       370        380        390        400        410 
FRPDLNSASF QRPQSETNVA SGCPLFFPLN KLQSPKHAYV KDDTMFVKCV VDTNT 

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42.01-R42.10(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000041215.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000041215.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02024787 Genomic DNA. No translation available.
RefSeqNP_001179730.1. NM_001192801.1.
XP_005210651.1. XM_005210594.1.
XP_005210652.1. XM_005210595.1.
UniGeneBt.42593.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEE1BMI8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000043659; ENSBTAP00000041215; ENSBTAG00000003012.
GeneID540944.
KEGGbta:540944.

Organism-specific databases

CTD7185.

Phylogenomic databases

GeneTreeENSGT00550000074359.
KOK03172.
OMAHFMKEKL.
OrthoDBEOG7966G5.
TreeFamTF321154.

Family and domain databases

InterProIPR002083. MATH.
IPR012227. TNF_rcpt--assoc_TRAF.
IPR008974. TRAF-like.
IPR027136. TRAF1.
[Graphical view]
PANTHERPTHR10131:SF29. PTHR10131:SF29. 1 hit.
PfamPF00917. MATH. 1 hit.
[Graphical view]
PIRSFPIRSF015614. TRAF. 1 hit.
SMARTSM00061. MATH. 1 hit.
[Graphical view]
SUPFAMSSF49599. SSF49599. 1 hit.
PROSITEPS50144. MATH. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20878924.

Entry information

Entry nameE1BMI8_BOVIN
AccessionPrimary (citable) accession number: E1BMI8
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 16, 2011
Last modified: February 19, 2014
This is version 22 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)