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E1BIQ3 (E1BIQ3_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified March 6, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Uncharacterized protein Ensembl ENSBTAP00000005055
Gene names
Name:STX16 Ensembl ENSBTAP00000005055
OrganismBos taurus (Bovine) [Reference proteome] Ensembl ENSBTAP00000005055
Taxonomic identifier9913 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length326 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the syntaxin family. RuleBase RU003858

Contains 1 t-SNARE coiled-coil homology domain. SAAS SAAS000727

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000005055

Sequences

Sequence LengthMass (Da)Tools
E1BIQ3 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: 65E61154A42E407D

FASTA32637,277
        10         20         30         40         50         60 
MATRRLTDAF LLLRNNSIQN RQLLAEQVSS HTTSSPLHSR SIAAELDELA DDRMALVSGI 

        70         80         90        100        110        120 
SLDPEAAIGV TKRSPPKWVD GVDEIQYDVG RIKQKMKELA SLHDQHLNRP TLDDSSEQEH 

       130        140        150        160        170        180 
AIEITTQEIT QLFHRCQRAV QALPSRARRA CSEQEERLLR NVVASLAQAL QELSTSFRHA 

       190        200        210        220        230        240 
QSSYLRRMKN REERSQHFFA TSVPLMDDGE DNTLYDRGFT DEQLVLVEQN TLLVEERERE 

       250        260        270        280        290        300 
IRQIVQSISD LNEIFRDLGA MIVEQGTVLD RIDYNVEQSC IKTEDGLKQL HKAEQYQKKN 

       310        320 
RKMLVILILL VIIIVLTVVL VGVKSR

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42-R42(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000005055.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000005055.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		DAAA02036334 Genomic DNA. No translation available.
IPIIPI00700557.
RefSeqXP_002692463.1. XM_002692417.1.
XP_871460.1. XM_866367.2.
UniGeneBt.35446.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000005055; ENSBTAP00000005055; ENSBTAG00000003872.
GeneID519624.
KEGGbta:519624.

Organism-specific databases

CTD8675.

Phylogenomic databases

GeneTreeENSGT00550000075126.
KOK08489.
OMADYNVEQT.

Family and domain databases

InterProIPR006012. Syntaxin/epimorphin_CS.
IPR006011. Syntaxin_N.
IPR010989. t-SNARE.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF05739. SNARE. 1 hit.
PF00804. Syntaxin. 1 hit.
[Graphical view]
SMARTSM00397. t_SNARE. 1 hit.
[Graphical view]
SUPFAMSSF47661. t-snare. 1 hit.
PROSITEPS00914. SYNTAXIN. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20872909.

Entry information

Entry nameE1BIQ3_BOVIN
AccessionPrimary (citable) accession number: E1BIQ3
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: March 6, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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