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Protein
Submitted name:

Uncharacterized protein

Gene

ABCG1

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: Annotation score: 4 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

ReactomeiR-BTA-1369062. ABC transporters in lipid homeostasis.
R-BTA-194223. HDL-mediated lipid transport.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ABCG1Imported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei414 – 43118HelicalSequence analysisAdd
BLAST
Transmembranei443 – 46422HelicalSequence analysisAdd
BLAST
Transmembranei484 – 50926HelicalSequence analysisAdd
BLAST
Transmembranei521 – 54525HelicalSequence analysisAdd
BLAST
Transmembranei551 – 57323HelicalSequence analysisAdd
BLAST
Transmembranei585 – 60319HelicalSequence analysisAdd
BLAST
Transmembranei635 – 65723HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiE1BDU6.

Interactioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000028342.

Structurei

3D structure databases

ProteinModelPortaliE1BDU6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini76 – 316241ABC transporterInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 ABC transporter domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG0061. Eukaryota.
COG1131. LUCA.
GeneTreeiENSGT00740000114855.
InParanoidiE1BDU6.
OMAiCNTNETC.
OrthoDBiEOG7KWSGT.
TreeFamiTF105210.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR013525. ABC_2_trans.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR020064. ABCG1.
IPR027417. P-loop_NTPase.
IPR005284. Pigment_permease.
[Graphical view]
PANTHERiPTHR19241:SF177. PTHR19241:SF177. 1 hit.
PfamiPF01061. ABC2_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00955. 3a01204. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E1BDU6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MACLMATFSV GTAMNGSSGM TEPKSVCVSV DEVVFSNRDR DTVEKELLNG
60 70 80 90 100
HLKKEDNNLT EAQRLSSLPR RAAVNIEFKD LSYSVSEGPW WRKKGYKTLL
110 120 130 140 150
KGISGKFNSG ELVAIMGPSG AGKSTLMNIL AGYRETGMKG EVLINGLPRD
160 170 180 190 200
LRCFRKVSCY IMQDDLLLPH LTVQEAMMVS AHLKLQEKDE GRREMVKEIL
210 220 230 240 250
TALGLLSCAN TRTGSLSGGQ RKRLAIALEL VNNPPVMFFD EPTSGLDSAS
260 270 280 290 300
CFQVVSLMKG LAQGGRSIIC TIHQPSAKLF ELFDQLYVLS QGQCVYRGKV
310 320 330 340 350
SNLVPYLRDL GLNCPTYHNP ADFVMEVASG EYGDQNGRLV RAVWEGKCDS
360 370 380 390 400
DCRREPGGDA EVNPFIWHRP SEEDSTSMEG CHSFSASCLT QFCILFKRTF
410 420 430 440 450
LSIMRDSVLT HLRITSHIGI GLLIGLLYLG IGNEAKKVLS NSGFLFFSML
460 470 480 490 500
FLMFAALMPT VLTFPLEMSV FLREHLNYWY SLKAYYLAKT MADVPFQIMF
510 520 530 540 550
PVAYCSIVYW MTSQPSDAVR FVLFAALGTM TSLVAQSLGL LIGAASTSLQ
560 570 580 590 600
VATFVGPVTA IPVLLFSGFF VSFDTIPTYL QWMSYVSYVR YGFEGVILSI
610 620 630 640 650
YGLDREDLHC NTNETCHFQK SEAILRELDV ENAKLYLDFI VLGIFFISLR
660
LIAYLVLRYK IRAER
Length:665
Mass (Da):74,142
Last modified:November 2, 2010 - v1
Checksum:i710F7956734775FB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02003260 Genomic DNA. No translation available.
RefSeqiXP_005202056.1. XM_005201999.3.
UniGeneiBt.29337.

Genome annotation databases

EnsembliENSBTAT00000028342; ENSBTAP00000028342; ENSBTAG00000021272.
GeneIDi510745.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02003260 Genomic DNA. No translation available.
RefSeqiXP_005202056.1. XM_005201999.3.
UniGeneiBt.29337.

3D structure databases

ProteinModelPortaliE1BDU6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000028342.

Proteomic databases

PaxDbiE1BDU6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSBTAT00000028342; ENSBTAP00000028342; ENSBTAG00000021272.
GeneIDi510745.

Organism-specific databases

CTDi9619.

Phylogenomic databases

eggNOGiKOG0061. Eukaryota.
COG1131. LUCA.
GeneTreeiENSGT00740000114855.
InParanoidiE1BDU6.
OMAiCNTNETC.
OrthoDBiEOG7KWSGT.
TreeFamiTF105210.

Enzyme and pathway databases

ReactomeiR-BTA-1369062. ABC transporters in lipid homeostasis.
R-BTA-194223. HDL-mediated lipid transport.

Miscellaneous databases

NextBioi20869597.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR013525. ABC_2_trans.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR020064. ABCG1.
IPR027417. P-loop_NTPase.
IPR005284. Pigment_permease.
[Graphical view]
PANTHERiPTHR19241:SF177. PTHR19241:SF177. 1 hit.
PfamiPF01061. ABC2_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00955. 3a01204. 1 hit.
PROSITEiPS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HerefordImported.

Entry informationi

Entry nameiE1BDU6_BOVIN
AccessioniPrimary (citable) accession number: E1BDU6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: April 13, 2016
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.