E1BBB8 (E1BBB8_BOVIN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSBTAP00000038047

Gene names

Name:

TRPS1 Ensembl ENSBTAP00000038047

Organism

Bos taurus (Bovine) [Reference proteome] Ensembl ENSBTAP00000038047

Taxonomic identifier

9913 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Cetartiodactyla › Ruminantia › Pecora › Bovidae › Bovinae › Bos

Protein attributes

Sequence length	1293 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000038047

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	negative regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara
Cellular_component	nucleus Inferred from electronic annotation. Source: Compara
Molecular_function	sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E1BBB8 [UniParc]. Last modified November 16, 2011. Version 2. Checksum: 4EBC7C268BFC288D	FASTA	1,293	142,240
	10 20 30 40 50 60 MPYEVNAGYD FTNMVRKKNP PLRNIASEGE GQTLEPVGTE SKGPGKNKEF SADQMSENTD 70 80 90 100 110 120 QSDATELNNK EEHSLHVQDP SSSSKKDLKS SVLSEKAGFN YENSSKGGNL PSYSHDEVTE 130 140 150 160 170 180 RNMLAFSSPA AGGVCEPLKS PQRAEADDPQ DMACTPSGDS LEMKEDQKMS PKATEETGQV 190 200 210 220 230 240 QSGQANCQGS SPVSVASKNP QVPSDGGVRL NKSKTDVLVN DNPDPAPLSP ELQDFKCNIC 250 260 270 280 290 300 GYGYYGNDPT DLIKHFRKYH LGLHNRTRQD AELDSKILAL HNMVQFSHSK DFQKVNRSVL 310 320 330 340 350 360 SGVLQDISSS RPVLLNGTYD VQVTSGGTFI GIGRKTPDCQ GNTKYFRCKF CNFTYMGNSS 370 380 390 400 410 420 TELEQHFLQT HPNKIKASLP SSEGAKPSEK NSNKSIPAVR SGDAGDLGKW QDKITVKAGD 430 440 450 460 470 480 DSPVGYSVPI KPLDSRQNGT EATSYYWCKF CSFSCESSSS LKLLEHYGKQ HGGVQSGGLN 490 500 510 520 530 540 PELNDKLSRG SVINQNDLAK SAEGEPMTKA DKGSSGVKKK DFSSKGAEDN MVTSYNCQFC 550 560 570 580 590 600 DFRYSKSHGP DVIVVGPLLR HYQQLHNIHK CTIKHCPFCP RGLCSPEKHL GEITYPFACR 610 620 630 640 650 660 KSNCSHCALL LLHLSPGAAG SSRVKHQCHQ CSFSTPDVDV LLFHYESAHE SQASDVKQEG 670 680 690 700 710 720 SHLQGPDGQP AVKESKEHSC TKCDFITQVE EEISRHYRRA HSCYKCRQCS FTAAETQSLL 730 740 750 760 770 780 EHFNTVHCQE QDSTTANGEE DGHAVSTIKE EPKIDLKVYS LLNPDSKMGE PVAESVVKRE 790 800 810 820 830 840 KLEDKDGLKE KAWAESSSDD LRSVTWRGAD ILRGSPSYTQ ASLGLLTPVS GPQEQTKTLR 850 860 870 880 890 900 DSPNVEAAHL ARPIYGLAVD TKGFLQGAPA GGEKAGALPQ QYPASGESKS KDESQSLLRR 910 920 930 940 950 960 RRGSGVFCAN CLTTKTSLWR KNANGGYVCN ACGLYQKLHS TPRPLNIIKQ NNGEQIIRRR 970 980 990 1000 1010 1020 TRKRLNPEAL QAEQLNKQQR AGSEEQVNGS PLERRSEDHL TEGHQREIPL PSLSKYEAQG 1030 1040 1050 1060 1070 1080 SLTKSHSAQQ PVLVSQTLDI HKRMQPLHIQ IKSPQESTGD PGNSSSVSEG KGSSERGSPI 1090 1100 1110 1120 1130 1140 EKYMRPAKHP NYSPPGSPIE KYQYPLFGLP FVHNDFQSEA DWLRFWSKYK LSVPGNPHYL 1150 1160 1170 1180 1190 1200 SHVPGLPNPC QNYVPYPTFN LPPHFSAVGS DNDIPLDLAI KHSRPGPTAN GASKEKTKAP 1210 1220 1230 1240 1250 1260 SNVKNEGPLN VVKTEKVDRS TQDELSTKCV HCGIVFLDEV MYALHMSCHG DSGPFQCSIC 1270 1280 1290 QHLCTDKYDF TTHIQRGLHR NNAQVEKNGK PKE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"A whole-genome assembly of the domestic cow, Bos taurus." Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L. Genome Biol. 10:R42-R42(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Hereford Ensembl ENSBTAP00000038047.
[2]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Hereford Ensembl ENSBTAP00000038047.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DAAA02039090 Genomic DNA. No translation available. DAAA02039091 Genomic DNA. No translation available. DAAA02039092 Genomic DNA. No translation available. DAAA02039093 Genomic DNA. No translation available. DAAA02039094 Genomic DNA. No translation available.
IPI	IPI00695327.
RefSeq	NP_001179842.1. NM_001192913.1.
UniGene	Bt.70133.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSBTAT00000038232; ENSBTAP00000038047; ENSBTAG00000017694.
GeneID	537652.
KEGG	bta:537652.
Organism-specific databases
CTD	7227.
Phylogenomic databases
GeneTree	ENSGT00550000074392.
OMA	ESVHESQ.
Family and domain databases
Gene3D	3.30.50.10. 1 hit.
InterPro	IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR000679. Znf_GATA. IPR013088. Znf_NHR/GATA. [Graphical view]
Pfam	PF00320. GATA. 1 hit. [Graphical view]
PRINTS	PR00619. GATAZNFINGER.
SMART	SM00355. ZnF_C2H2. 9 hits. SM00401. ZnF_GATA. 1 hit. [Graphical view]
PROSITE	PS00344. GATA_ZN_FINGER_1. 1 hit. PS50114. GATA_ZN_FINGER_2. 1 hit. PS00028. ZINC_FINGER_C2H2_1. 2 hits. PS50157. ZINC_FINGER_C2H2_2. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20877178.

Entry information

Entry name

E1BBB8_BOVIN

Accession

Primary (citable) accession number: E1BBB8

Entry history

Integrated into UniProtKB/TrEMBL:	November 2, 2010
Last sequence update:	November 16, 2011
Last modified:	March 6, 2013
This is version 19 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)