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Protein
Submitted name:

Transcriptional repressor GATA binding 1

Gene

TRPS1

Organism
Bos taurus (Bovine)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional repressor GATA binding 1Imported
Gene namesi
Name:TRPS1Imported
OrganismiBos taurus (Bovine)Imported
Taxonomic identifieri9913 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaRuminantiaPecoraBovidaeBovinaeBos
Proteomesi
  • UP000009136 Componenti: Chromosome 14

Organism-specific databases

VGNCiVGNC:36395 TRPS1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiE1BBB8

Expressioni

Gene expression databases

BgeeiENSBTAG00000017694

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9913.ENSBTAP00000038047

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini704 – 732C2H2-typeInterPro annotationAdd BLAST29
Domaini902 – 960GATA-typeInterPro annotationAdd BLAST59

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1601 Eukaryota
COG5641 LUCA
GeneTreeiENSGT00760000119221
InParanoidiE1BBB8
KOiK22040
OMAiHYRRAHS
OrthoDBiEOG091G00VI
TreeFamiTF350812

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR028440 TRPS1
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
IPR000679 Znf_GATA
IPR013088 Znf_NHR/GATA
PANTHERiPTHR10071:SF176 PTHR10071:SF176, 1 hit
PfamiView protein in Pfam
PF00320 GATA, 1 hit
PRINTSiPR00619 GATAZNFINGER
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 9 hits
SM00401 ZnF_GATA, 1 hit
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00344 GATA_ZN_FINGER_1, 1 hit
PS50114 GATA_ZN_FINGER_2, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 1 hit

Sequencei

Sequence statusi: Complete.

E1BBB8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPYEVNAGYD FTNMVRKKNP PLRNIASEGE GQTLEPVGTE SKGPGKNKEF
60 70 80 90 100
SADQMSENTD QSDATELNNK EEHSLHVQDP SSSSKKDLKS SVLSEKAGFN
110 120 130 140 150
YENSSKGGNL PSYSHDEVTE RNMLAFSSPA AGGVCEPLKS PQRAEADDPQ
160 170 180 190 200
DMACTPSGDS LEMKEDQKMS PKATEETGQV QSGQANCQGS SPVSVASKNP
210 220 230 240 250
QVPSDGGVRL NKSKTDVLVN DNPDPAPLSP ELQDFKCNIC GYGYYGNDPT
260 270 280 290 300
DLIKHFRKYH LGLHNRTRQD AELDSKILAL HNMVQFSHSK DFQKVNRSVL
310 320 330 340 350
SGVLQDISSS RPVLLNGTYD VQVTSGGTFI GIGRKTPDCQ GNTKYFRCKF
360 370 380 390 400
CNFTYMGNSS TELEQHFLQT HPNKIKASLP SSEGAKPSEK NSNKSIPAVR
410 420 430 440 450
SGDAGDLGKW QDKITVKAGD DSPVGYSVPI KPLDSRQNGT EATSYYWCKF
460 470 480 490 500
CSFSCESSSS LKLLEHYGKQ HGGVQSGGLN PELNDKLSRG SVINQNDLAK
510 520 530 540 550
SAEGEPMTKA DKGSSGVKKK DFSSKGAEDN MVTSYNCQFC DFRYSKSHGP
560 570 580 590 600
DVIVVGPLLR HYQQLHNIHK CTIKHCPFCP RGLCSPEKHL GEITYPFACR
610 620 630 640 650
KSNCSHCALL LLHLSPGAAG SSRVKHQCHQ CSFSTPDVDV LLFHYESAHE
660 670 680 690 700
SQASDVKQEG SHLQGPDGQP AVKESKEHSC TKCDFITQVE EEISRHYRRA
710 720 730 740 750
HSCYKCRQCS FTAAETQSLL EHFNTVHCQE QDSTTANGEE DGHAVSTIKE
760 770 780 790 800
EPKIDLKVYS LLNPDSKMGE PVAESVVKRE KLEDKDGLKE KAWAESSSDD
810 820 830 840 850
LRSVTWRGAD ILRGSPSYTQ ASLGLLTPVS GPQEQTKTLR DSPNVEAAHL
860 870 880 890 900
ARPIYGLAVD TKGFLQGAPA GGEKAGALPQ QYPASGESKS KDESQSLLRR
910 920 930 940 950
RRGSGVFCAN CLTTKTSLWR KNANGGYVCN ACGLYQKLHS TPRPLNIIKQ
960 970 980 990 1000
NNGEQIIRRR TRKRLNPEAL QAEQLNKQQR AGSEEQVNGS PLERRSEDHL
1010 1020 1030 1040 1050
TEGHQREIPL PSLSKYEAQG SLTKSHSAQQ PVLVSQTLDI HKRMQPLHIQ
1060 1070 1080 1090 1100
IKSPQESTGD PGNSSSVSEG KGSSERGSPI EKYMRPAKHP NYSPPGSPIE
1110 1120 1130 1140 1150
KYQYPLFGLP FVHNDFQSEA DWLRFWSKYK LSVPGNPHYL SHVPGLPNPC
1160 1170 1180 1190 1200
QNYVPYPTFN LPPHFSAVGS DNDIPLDLAI KHSRPGPTAN GASKEKTKAP
1210 1220 1230 1240 1250
SNVKNEGPLN VVKTEKVDRS TQDELSTKCV HCGIVFLDEV MYALHMSCHG
1260 1270 1280 1290
DSGPFQCSIC QHLCTDKYDF TTHIQRGLHR NNAQVEKNGK PKE
Length:1,293
Mass (Da):142,240
Last modified:November 16, 2011 - v2
Checksum:i4EBC7C268BFC288D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DAAA02039090 Genomic DNA No translation available.
DAAA02039091 Genomic DNA No translation available.
DAAA02039092 Genomic DNA No translation available.
DAAA02039093 Genomic DNA No translation available.
DAAA02039094 Genomic DNA No translation available.
RefSeqiNP_001179842.1, NM_001192913.1
XP_010810445.1, XM_010812143.2

Genome annotation databases

EnsembliENSBTAT00000038232; ENSBTAP00000038047; ENSBTAG00000017694
GeneIDi537652
KEGGibta:537652

Similar proteinsi

Entry informationi

Entry nameiE1BBB8_BOVIN
AccessioniPrimary (citable) accession number: E1BBB8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 16, 2011
Last modified: March 28, 2018
This is version 59 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health