Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

E1BBB8 (E1BBB8_BOVIN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length1293 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data. Ensembl ENSBTAP00000038047

Sequences

Sequence LengthMass (Da)Tools
E1BBB8 [UniParc].

Last modified November 16, 2011. Version 2.
Checksum: 4EBC7C268BFC288D

FASTA1,293142,240
        10         20         30         40         50         60 
MPYEVNAGYD FTNMVRKKNP PLRNIASEGE GQTLEPVGTE SKGPGKNKEF SADQMSENTD 

        70         80         90        100        110        120 
QSDATELNNK EEHSLHVQDP SSSSKKDLKS SVLSEKAGFN YENSSKGGNL PSYSHDEVTE 

       130        140        150        160        170        180 
RNMLAFSSPA AGGVCEPLKS PQRAEADDPQ DMACTPSGDS LEMKEDQKMS PKATEETGQV 

       190        200        210        220        230        240 
QSGQANCQGS SPVSVASKNP QVPSDGGVRL NKSKTDVLVN DNPDPAPLSP ELQDFKCNIC 

       250        260        270        280        290        300 
GYGYYGNDPT DLIKHFRKYH LGLHNRTRQD AELDSKILAL HNMVQFSHSK DFQKVNRSVL 

       310        320        330        340        350        360 
SGVLQDISSS RPVLLNGTYD VQVTSGGTFI GIGRKTPDCQ GNTKYFRCKF CNFTYMGNSS 

       370        380        390        400        410        420 
TELEQHFLQT HPNKIKASLP SSEGAKPSEK NSNKSIPAVR SGDAGDLGKW QDKITVKAGD 

       430        440        450        460        470        480 
DSPVGYSVPI KPLDSRQNGT EATSYYWCKF CSFSCESSSS LKLLEHYGKQ HGGVQSGGLN 

       490        500        510        520        530        540 
PELNDKLSRG SVINQNDLAK SAEGEPMTKA DKGSSGVKKK DFSSKGAEDN MVTSYNCQFC 

       550        560        570        580        590        600 
DFRYSKSHGP DVIVVGPLLR HYQQLHNIHK CTIKHCPFCP RGLCSPEKHL GEITYPFACR 

       610        620        630        640        650        660 
KSNCSHCALL LLHLSPGAAG SSRVKHQCHQ CSFSTPDVDV LLFHYESAHE SQASDVKQEG 

       670        680        690        700        710        720 
SHLQGPDGQP AVKESKEHSC TKCDFITQVE EEISRHYRRA HSCYKCRQCS FTAAETQSLL 

       730        740        750        760        770        780 
EHFNTVHCQE QDSTTANGEE DGHAVSTIKE EPKIDLKVYS LLNPDSKMGE PVAESVVKRE 

       790        800        810        820        830        840 
KLEDKDGLKE KAWAESSSDD LRSVTWRGAD ILRGSPSYTQ ASLGLLTPVS GPQEQTKTLR 

       850        860        870        880        890        900 
DSPNVEAAHL ARPIYGLAVD TKGFLQGAPA GGEKAGALPQ QYPASGESKS KDESQSLLRR 

       910        920        930        940        950        960 
RRGSGVFCAN CLTTKTSLWR KNANGGYVCN ACGLYQKLHS TPRPLNIIKQ NNGEQIIRRR 

       970        980        990       1000       1010       1020 
TRKRLNPEAL QAEQLNKQQR AGSEEQVNGS PLERRSEDHL TEGHQREIPL PSLSKYEAQG 

      1030       1040       1050       1060       1070       1080 
SLTKSHSAQQ PVLVSQTLDI HKRMQPLHIQ IKSPQESTGD PGNSSSVSEG KGSSERGSPI 

      1090       1100       1110       1120       1130       1140 
EKYMRPAKHP NYSPPGSPIE KYQYPLFGLP FVHNDFQSEA DWLRFWSKYK LSVPGNPHYL 

      1150       1160       1170       1180       1190       1200 
SHVPGLPNPC QNYVPYPTFN LPPHFSAVGS DNDIPLDLAI KHSRPGPTAN GASKEKTKAP 

      1210       1220       1230       1240       1250       1260 
SNVKNEGPLN VVKTEKVDRS TQDELSTKCV HCGIVFLDEV MYALHMSCHG DSGPFQCSIC 

      1270       1280       1290 
QHLCTDKYDF TTHIQRGLHR NNAQVEKNGK PKE 

« Hide

References

« Hide 'large scale' references
[1]"A whole-genome assembly of the domestic cow, Bos taurus."
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C., Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S., Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.
Genome Biol. 10:R42.01-R42.10(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Hereford Ensembl ENSBTAP00000038047.
[2]Ensembl
Submitted (JUL-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Hereford Ensembl ENSBTAP00000038047.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DAAA02039090 Genomic DNA. No translation available.
DAAA02039091 Genomic DNA. No translation available.
DAAA02039092 Genomic DNA. No translation available.
DAAA02039093 Genomic DNA. No translation available.
DAAA02039094 Genomic DNA. No translation available.
RefSeqNP_001179842.1. NM_001192913.1.
UniGeneBt.70133.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSBTAT00000038232; ENSBTAP00000038047; ENSBTAG00000017694.
GeneID537652.
KEGGbta:537652.

Organism-specific databases

CTD7227.

Phylogenomic databases

GeneTreeENSGT00750000117454.
OMAHYESVHE.
OrthoDBEOG72ZCD8.
TreeFamTF350812.

Family and domain databases

Gene3D3.30.50.10. 1 hit.
InterProIPR028440. Trps1.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR000679. Znf_GATA.
IPR013088. Znf_NHR/GATA.
[Graphical view]
PANTHERPTHR10071:SF6. PTHR10071:SF6. 1 hit.
PfamPF00320. GATA. 1 hit.
[Graphical view]
PRINTSPR00619. GATAZNFINGER.
SMARTSM00355. ZnF_C2H2. 9 hits.
SM00401. ZnF_GATA. 1 hit.
[Graphical view]
PROSITEPS00344. GATA_ZN_FINGER_1. 1 hit.
PS50114. GATA_ZN_FINGER_2. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio20877178.

Entry information

Entry nameE1BBB8_BOVIN
AccessionPrimary (citable) accession number: E1BBB8
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 16, 2011
Last modified: April 16, 2014
This is version 24 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)