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E0X767

- E0X767_9ZZZZ

UniProt

E0X767 - E0X767_9ZZZZ

Protein
Submitted name:

Ribonuclease H

Gene
N/A
Organism
uncultured organism
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. nucleic acid binding Source: InterPro
    2. RNA-DNA hybrid ribonuclease activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    HydrolaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribonuclease HImported (EC:3.1.26.4Imported)
    Organismiuncultured organismImported
    Taxonomic identifieri155900 [NCBI]
    Taxonomic lineageiunclassified sequencesenvironmental samples

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3U3GX-ray1.40A/B/C/D1-140[»]
    4H8KX-ray2.30A/B1-140[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    Gene3Di3.30.420.10. 1 hit.
    InterProiIPR012337. RNaseH-like_dom.
    IPR002156. RNaseH_domain.
    [Graphical view]
    PfamiPF00075. RNase_H. 1 hit.
    [Graphical view]
    SUPFAMiSSF53098. SSF53098. 1 hit.
    PROSITEiPS50879. RNASE_H. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E0X767-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNKIIIYTDG GARGNPGPAG IGVVITDEKG NTLHESSAYI GETTNNVAEY    50
    EALIRALEDL QMFGDKLVDM EVEVRMDSEL IVRQMQGVYK VKEPTLKEKF 100
    AKIAHIKMER VPNLVFVHIP REKNARADEL VNEAIDKALS 140
    Length:140
    Mass (Da):15,611
    Last modified:November 2, 2010 - v1
    Checksum:i814C50077858E5C3
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GQ855311 Genomic DNA. Translation: ACV72189.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GQ855311 Genomic DNA. Translation: ACV72189.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3U3G X-ray 1.40 A/B/C/D 1-140 [» ]
    4H8K X-ray 2.30 A/B 1-140 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 3.30.420.10. 1 hit.
    InterProi IPR012337. RNaseH-like_dom.
    IPR002156. RNaseH_domain.
    [Graphical view ]
    Pfami PF00075. RNase_H. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53098. SSF53098. 1 hit.
    PROSITEi PS50879. RNASE_H. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning of the RNase H genes from a metagenomic DNA library: identification of a new type 1 RNase H without a typical active-site motif."
      Kanaya E., Sakabe T., Nguyen N.T., Koikeda S., Koga Y., Takano K., Kanaya S.
      J. Appl. Microbiol. 109:974-983(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Activity, stability, and structure of metagenome-derived LC11-RNase H1, a homolog of Sulfolobus tokodaii RNase H1."
      Nguyen T.N., Angkawidjaja C., Kanaya E., Koga Y., Takano K., Kanaya S.
      Protein Sci. 21:553-561(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS).
    3. "Crystal structure of metagenome-derived LC11-RNase H1 in complex with RNA/DNA hybrid."
      Nguyen T.N., You D.J., Matsumoto H., Kanaya E., Koga Y., Kanaya S.
      J. Struct. Biol. 182:144-154(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS).

    Entry informationi

    Entry nameiE0X767_9ZZZZ
    AccessioniPrimary (citable) accession number: E0X767
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 2, 2010
    Last sequence update: November 2, 2010
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3