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E0X767

- E0X767_9ZZZZ

UniProt

E0X767 - E0X767_9ZZZZ

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Protein
Submitted name:

Ribonuclease H

Gene
N/A
Organism
uncultured organism
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
  2. RNA-DNA hybrid ribonuclease activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Ribonuclease HImported (EC:3.1.26.4Imported)
Organismiuncultured organismImported
Taxonomic identifieri155900 [NCBI]
Taxonomic lineageiunclassified sequencesenvironmental samples

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3U3GX-ray1.40A/B/C/D1-140[»]
4H8KX-ray2.30A/B1-140[»]

Family & Domainsi

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR012337. RNaseH-like_dom.
IPR002156. RNaseH_domain.
[Graphical view]
PfamiPF00075. RNase_H. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50879. RNASE_H. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E0X767-1 [UniParc]FASTAAdd to Basket

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MNKIIIYTDG GARGNPGPAG IGVVITDEKG NTLHESSAYI GETTNNVAEY    50
EALIRALEDL QMFGDKLVDM EVEVRMDSEL IVRQMQGVYK VKEPTLKEKF 100
AKIAHIKMER VPNLVFVHIP REKNARADEL VNEAIDKALS 140
Length:140
Mass (Da):15,611
Last modified:November 2, 2010 - v1
Checksum:i814C50077858E5C3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GQ855311 Genomic DNA. Translation: ACV72189.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GQ855311 Genomic DNA. Translation: ACV72189.1 .

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3U3G X-ray 1.40 A/B/C/D 1-140 [» ]
4H8K X-ray 2.30 A/B 1-140 [» ]
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 3.30.420.10. 1 hit.
InterProi IPR012337. RNaseH-like_dom.
IPR002156. RNaseH_domain.
[Graphical view ]
Pfami PF00075. RNase_H. 1 hit.
[Graphical view ]
SUPFAMi SSF53098. SSF53098. 1 hit.
PROSITEi PS50879. RNASE_H. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Cloning of the RNase H genes from a metagenomic DNA library: identification of a new type 1 RNase H without a typical active-site motif."
    Kanaya E., Sakabe T., Nguyen N.T., Koikeda S., Koga Y., Takano K., Kanaya S.
    J. Appl. Microbiol. 109:974-983(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Activity, stability, and structure of metagenome-derived LC11-RNase H1, a homolog of Sulfolobus tokodaii RNase H1."
    Nguyen T.N., Angkawidjaja C., Kanaya E., Koga Y., Takano K., Kanaya S.
    Protein Sci. 21:553-561(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS).
  3. "Crystal structure of metagenome-derived LC11-RNase H1 in complex with RNA/DNA hybrid."
    Nguyen T.N., You D.J., Matsumoto H., Kanaya E., Koga Y., Kanaya S.
    J. Struct. Biol. 182:144-154(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS).

Entry informationi

Entry nameiE0X767_9ZZZZ
AccessioniPrimary (citable) accession number: E0X767
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: April 16, 2014
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3