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E0W2H3 (E0W2H3_PEDHC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL EEB19829.1
Gene names
ORF Names:Phum_PHUM592850 EMBL EEB19829.1
OrganismPediculus humanus subsp. corporis (Body louse) [Reference proteome]
Taxonomic identifier121224 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraParaneopteraPhthirapteraAnopluraPediculidaePediculus

Protein attributes

Sequence length891 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
E0W2H3 [UniParc].

Last modified November 2, 2010. Version 1.
Checksum: E252DFE0E852D929

FASTA891102,161
        10         20         30         40         50         60 
MSLAKKISFG NFCQLCSKIK SADHEKKIII LRNYISNWKK KAKDIESDGL NLDDSFFPIF 

        70         80         90        100        110        120 
RLLIPHLDRE RGAYGIKERT LAKIYISILS LPKDGEDALK LLNCKNPKTS YFNNCDFASI 

       130        140        150        160        170        180 
AFCILRNRCA EGGQLSVEEV NKHLDKISTS HAANEPRNVD AELISLLKST NAEEQKWLIR 

       190        200        210        220        230        240 
ILLKDVKLGL SENVIFKCYH PDARELYDSS NSLRKICDLL NDPEIRLNEI QIQLFTPFKP 

       250        260        270        280        290        300 
MLSEECDIQK IDYYLKRSCH FFIETKLDGE RFQLHFEEGN FKYFSRNGYD FTTNFGSSKR 

       310        320        330        340        350        360 
EGNLSPRIFK RIPPHVKSFV LDGEMMSWDR ITRSFSSKGK NLDVKNLKEG NHYQSCFCVF 

       370        380        390        400        410        420 
DILLYNGEVL TNKPLIARLE ILEKIIEPEE GTIIILNRKQ ISSNSEVIDS LNEAIDNREE 

       430        440        450        460        470        480 
GIVMKESMSV YKPNVRKNGG WYKIKPEYTD GLAETLDLLI IGGYYGRGHL KGSVNHFLLG 

       490        500        510        520        530        540 
AAVNVSDDNI LFYSTGRVGS GYSIKDLEDL SLKLKPYWKE AKNDRMPLSV KWGKEKPDVW 

       550        560        570        580        590        600 
IKPDKSYILE IKASEIVSSA IFKSGYALRF PRVEKIRYDK TWKECLTLHN LEEIAKIASG 

       610        620        630        640        650        660 
KLTASHFSQS NIPSFLPKKK AKTSIWNINS ENFDFSGIKC ISKLLQGKEI CVFSGFKNIK 

       670        680        690        700        710        720 
KLDLEKKVVE FGGKLVKNPG KNTFCILAES DNHTRIKNII KCGSYDILYS SCFFSFLKIE 

       730        740        750        760        770        780 
NVKMPKLKPE HFLAMSKGTK EEFSKSYDKY GDHFTKKSTF DAIKHSLNAA SQEGKNIVLT 

       790        800        810        820        830        840 
SDEIYEMDVN LFGKTSPYSI FRNHVGYFDQ FKIVSDSSSK FSSDLDLFKI DFRFYGGKCS 

       850        860        870        880        890 
DAIDDSTVTH VITLSSDSSR INEINNENHK RKRKFHVVNE KWIESCIKEN A 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS235878 Genomic DNA. Translation: EEB19829.1.
RefSeqXP_002432567.1. XM_002432522.1.

3D structure databases

ProteinModelPortalE0W2H3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8232803.
KEGGphu:Phum_PHUM592850.
VectorBasePHUM592850. Pediculus humanus.

Organism-specific databases

CTD8232803.

Phylogenomic databases

KOK10777.
OMAISHFLCA.
OrthoDBEOG7BKCT2.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE0W2H3_PEDHC
AccessionPrimary (citable) accession number: E0W2H3
Entry history
Integrated into UniProtKB/TrEMBL: November 2, 2010
Last sequence update: November 2, 2010
Last modified: November 13, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)